RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 C12orf50Q8NA57 414 aaPredicted RBP12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 SHC3Q92529 594 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 ZSCAN5AQ9BUG6 496 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 DUSP16Q9BY84 665 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 EVLQ9UI08 416 aaPredicted RBP12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 PLK4O00444 970 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 WNT7AO00755 349 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 RGS8P57771 180 aaPredicted RBP12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 RPL6Q02878 288 aaKnown RBP12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 IL31RAQ8NI17 732 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 CPXM1Q96SM3 734 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 SLC6A15Q9H2J7 730 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 C5orf51A6NDU8 294 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 RIIAD1A6NNX1 92 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 PRLP01236 227 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 MAGEA2P43356 314 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 DSC2Q02487 901 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 GBE1Q04446 702 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 BNIP1Q12981 228 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 USP41Q3LFD5 358 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 SLC25A52Q3SY17 297 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 COLEC12Q5KU26 742 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 CAPN13Q6MZZ7 669 aaPredicted RBP12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 PEX5LQ8IYB4 626 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 PYROXD2Q8N2H3 581 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 ZBTB2Q8N680 514 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 DHRS1Q96LJ7 313 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 KREMEN1Q96MU8 473 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 AGAP2Q99490 1192 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 PLEKHA1Q9HB21 404 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 PDE10AQ9Y233 779 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 MED31Q9Y3C7 131 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 FKBP7Q9Y680 259 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 GLYATL1P3A0A0U1RQE8 302 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 EFCAB9A8MZ26 197 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 ZNF806P0C7X5 589 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 LAMP2P13473 410 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 SIDT2Q8NBJ9 832 aaKnown RBP12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 KCT2Q8NC54 265 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 MFSD3Q96ES6 412 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 CSPG4P5Q96PW8 444 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 PRDM16Q9HAZ2 1276 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 TMEM27Q9HBJ8 222 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 PIP5K1BO14986 540 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 CLDN9O95484 217 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 RPLP2P05387 115 aaKnown RBP12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 ANXA4P09525 319 aaPredicted RBP12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 PPIBP23284 216 aaKnown RBP12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 CTNNB1P35222 781 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 CCNFP41002 786 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 SEMG2Q02383 582 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 ASB18Q6ZVZ8 466 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 LAPTM4BQ86VI4 370 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 TRIM43Q96BQ3 446 aaPredicted RBP12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 INPP4AQ96PE3 977 aaPredicted RBP12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 OXCT2Q9BYC2 517 aaPredicted RBP12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 TVP23BQ9NYZ1 205 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 MARK1Q9P0L2 795 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 RIMKLBQ9ULI2 386 aa12.04□□□□□ -0.48
SEMA6A-202ENST00000343348 H3BM21 787 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 HTR1BP28222 390 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 CLCQ05315 142 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 TLR1Q15399 786 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 GRIK5Q16478 980 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 GPR153Q6NV75 609 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 ZCCHC10Q8TBK6 192 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 PCDHAC1Q9H158 963 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 NRCAMQ92823 1304 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 OR4F21O95013 312 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 APOC1P02654 83 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 VLDLRP98155 873 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 ELP6Q0PNE2 266 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 LARS2Q15031 903 aaKnown RBP12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 C6orf183Q5T699 404 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 POTEHQ6S545 545 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 XYLT1Q86Y38 959 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 KCNC2Q96PR1 638 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 NME6O75414 186 aaPredicted RBP12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 CYP3A4P08684 503 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 LRRC73Q5JTD7 316 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 MFSD14AQ96MC6 490 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 ZNF558Q96NG5 402 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 AIF1LQ9BQI0 150 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 CNTNAP1P78357 1384 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 SAGE2PA6NJ88 616 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 NOMO1Q15155 1222 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 EEF1DP3Q658K8 133 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 FOXRED2Q8IWF2 684 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 PIK3R3Q92569 461 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 KCNN2Q9H2S1 579 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 GMIPQ9P107 970 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 EIF2B4Q9UI10 523 aaKnown RBP12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 TRIM17Q9Y577 477 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 RAI2Q9Y5P3 530 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 MYO10Q9HD67 2058 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 ADGRB3O60242 1522 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 MTHFD1P11586 935 aaKnown RBP12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 CD247P20963 164 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 GABRR2P28476 465 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 ECHS1P30084 290 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms