RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 HM13Q8TCT9 377 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 CPT1BQ92523 772 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 SLCO2A1Q92959 643 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 TMEM121BQ9BXQ6 578 aaPredicted RBP18.85■□□□□ 0.61
SYNE4-202ENST00000340477 MRM3Q9HC36 420 aaKnown RBP18.85■□□□□ 0.61
SYNE4-202ENST00000340477 EPB41L5Q9HCM4 733 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 CHRAC1Q9NRG0 131 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 POT1Q9NUX5 634 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 FAM8A1Q9UBU6 413 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 SLC2A6Q9UGQ3 507 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 PCYOX1Q9UHG3 505 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 ACSL5Q9ULC5 683 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 PCDHB1Q9Y5F3 818 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 BPTFQ12830 3046 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 AKAP13Q12802 2813 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 UNC13CQ8NB66 2214 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 IGLV3-16A0A075B6K0 115 aa18.84■□□□□ 0.61
SYNE4-202ENST00000340477 TCRBV7S3A2A0A539 114 aa18.84■□□□□ 0.61
SYNE4-202ENST00000340477 OR51F1A6NGY5 319 aa18.84■□□□□ 0.61
SYNE4-202ENST00000340477 GSTM1P09488 218 aa18.84■□□□□ 0.61
SYNE4-202ENST00000340477 SLC35G4P0C7Q5 338 aa18.84■□□□□ 0.61
SYNE4-202ENST00000340477 XRCC1P18887 633 aaPredicted RBP18.84■□□□□ 0.61
SYNE4-202ENST00000340477 FOXN2P32314 431 aa18.84■□□□□ 0.61
SYNE4-202ENST00000340477 EPHA4P54764 986 aa18.84■□□□□ 0.61
SYNE4-202ENST00000340477 ETF1P62495 437 aaKnown RBP18.84■□□□□ 0.61
SYNE4-202ENST00000340477 CRADDP78560 199 aa18.84■□□□□ 0.61
SYNE4-202ENST00000340477 DR1Q01658 176 aa18.84■□□□□ 0.61
SYNE4-202ENST00000340477 GSTM4Q03013 218 aa18.84■□□□□ 0.61
SYNE4-202ENST00000340477 PTK6Q13882 451 aa18.84■□□□□ 0.61
SYNE4-202ENST00000340477 NFE2L1Q14494 772 aa18.84■□□□□ 0.61
SYNE4-202ENST00000340477 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.84■□□□□ 0.61
SYNE4-202ENST00000340477 ABRAXAS1Q6UWZ7 409 aa18.84■□□□□ 0.61
SYNE4-202ENST00000340477 C17orf53Q8N3J3 647 aaPredicted RBP18.84■□□□□ 0.61
SYNE4-202ENST00000340477 MCUQ8NE86 351 aa18.84■□□□□ 0.61
SYNE4-202ENST00000340477 ATXN7L3BQ96GX2 97 aa18.84■□□□□ 0.61
SYNE4-202ENST00000340477 LINC00615Q96LM1 132 aaPredicted RBP18.84■□□□□ 0.61
SYNE4-202ENST00000340477 TSSK1BQ9BXA7 367 aa18.84■□□□□ 0.61
SYNE4-202ENST00000340477 EPB41L1Q9H4G0 881 aa18.84■□□□□ 0.61
SYNE4-202ENST00000340477 CATSPERZQ9NTU4 200 aa18.84■□□□□ 0.61
SYNE4-202ENST00000340477 SYBUQ9NX95 663 aa18.84■□□□□ 0.61
SYNE4-202ENST00000340477 AKAP7Q9P0M2 348 aaPredicted RBP18.84■□□□□ 0.61
SYNE4-202ENST00000340477 ATXN7L1Q9ULK2 861 aaPredicted RBP18.84■□□□□ 0.61
SYNE4-202ENST00000340477 NEU2Q9Y3R4 380 aa18.84■□□□□ 0.61
SYNE4-202ENST00000340477 ENTPD2Q9Y5L3 495 aa18.84■□□□□ 0.61
SYNE4-202ENST00000340477 COL27A1Q8IZC6 1860 aaPredicted RBP18.84■□□□□ 0.61
SYNE4-202ENST00000340477 CCDC187A0A096LP49 1063 aa18.83■□□□□ 0.6
SYNE4-202ENST00000340477 PFDN6O15212 129 aa18.83■□□□□ 0.6
SYNE4-202ENST00000340477 FTH1P02794 183 aa18.83■□□□□ 0.6
SYNE4-202ENST00000340477 OR56A5P0C7T3 313 aa18.83■□□□□ 0.6
SYNE4-202ENST00000340477 MAPK9P45984 424 aa18.83■□□□□ 0.6
SYNE4-202ENST00000340477 CDKN1CP49918 316 aaPredicted RBP18.83■□□□□ 0.6
SYNE4-202ENST00000340477 GABREP78334 506 aa18.83■□□□□ 0.6
SYNE4-202ENST00000340477 EIF3IQ13347 325 aaKnown RBP18.83■□□□□ 0.6
SYNE4-202ENST00000340477 PHF19Q5T6S3 580 aa18.83■□□□□ 0.6
SYNE4-202ENST00000340477 ANKRD22Q5VYY1 191 aa18.83■□□□□ 0.6
SYNE4-202ENST00000340477 PACS1Q6VY07 963 aa18.83■□□□□ 0.6
SYNE4-202ENST00000340477 ZNF534Q76KX8 674 aa18.83■□□□□ 0.6
SYNE4-202ENST00000340477 ZNF761Q86XN6 746 aaPredicted RBP18.83■□□□□ 0.6
SYNE4-202ENST00000340477 PIANPQ8IYJ0 282 aa18.83■□□□□ 0.6
SYNE4-202ENST00000340477 LSMEM2Q8N112 164 aa18.83■□□□□ 0.6
SYNE4-202ENST00000340477 WDR36Q8NI36 951 aaKnown RBP18.83■□□□□ 0.6
SYNE4-202ENST00000340477 LIN37Q96GY3 246 aaPredicted RBP18.83■□□□□ 0.6
SYNE4-202ENST00000340477 CCM2Q9BSQ5 444 aa18.83■□□□□ 0.6
SYNE4-202ENST00000340477 SOX13Q9UN79 622 aa18.83■□□□□ 0.6
SYNE4-202ENST00000340477 PIKFYVEQ9Y2I7 2098 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 IGHV1OR21-1A0A087WYE8 117 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 LILRA5A6NI73 299 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 PRR19A6NJB7 356 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 SDR42E2A6NKP2 422 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 GOLGA8MH3BSY2 632 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 B4GAT1O43505 415 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 TMEM63AO94886 807 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 PRSS56P0CW18 603 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 CCKBRP32239 447 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 TTPAP49638 278 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 UBE2IP63279 158 aaKnown RBP18.82■□□□□ 0.6
SYNE4-202ENST00000340477 CYP4F3Q08477 520 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 RTP5Q14D33 572 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 ST3GAL2Q16842 350 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 KCTD19Q17RG1 926 aaPredicted RBP18.82■□□□□ 0.6
SYNE4-202ENST00000340477 C3orf38Q5JPI3 329 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 METRNLQ641Q3 311 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 SYT10Q6XYQ8 523 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 MPP5Q8N3R9 675 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 KDF1Q8NAX2 398 aaPredicted RBP18.82■□□□□ 0.6
SYNE4-202ENST00000340477 MDM1Q8TC05 714 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 TRIM44Q96DX7 344 aaPredicted RBP18.82■□□□□ 0.6
SYNE4-202ENST00000340477 SGSM3Q96HU1 749 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 ZNF778Q96MU6 729 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 KIFC1Q9BW19 673 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 FOXP3Q9BZS1 431 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 POLR1BQ9H9Y6 1135 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 UCK1Q9HA47 277 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 TREX1Q9NSU2 369 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 DKK4Q9UBT3 224 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 PSMD13Q9UNM6 376 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 IGF2RP11717 2491 aa18.82■□□□□ 0.6
SYNE4-202ENST00000340477 C17orf113A0A1B0GUU1 675 aa18.81■□□□□ 0.6
SYNE4-202ENST00000340477 MAGEB16A2A368 324 aa18.81■□□□□ 0.6
SYNE4-202ENST00000340477 OR52A4PA6NMU1 304 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms