RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 FUT4P22083 530 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 GTDC1Q4AE62 458 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 FAM98BQ52LJ0 330 aaKnown RBP14.22□□□□□ -0.13
CPSF7-201ENST00000340437 FAM171A1Q5VUB5 890 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 EGFLAMQ63HQ2 1017 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 LETMD1Q6P1Q0 360 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 SFRP1Q8N474 314 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 TBC1D15Q8TC07 691 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 PROKR1Q8TCW9 393 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 BIRC8Q96P09 236 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 LHPPQ9H008 270 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 SCUBE2Q9NQ36 999 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 TMEM248Q9NWD8 314 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 MYO1GB0I1T2 1018 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 ARVCFO00192 962 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 ESRRBO95718 433 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 UROSP10746 265 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 THRBP10828 461 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 HLA-DPA1P20036 260 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 HOXC13P31276 330 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 HK3P52790 923 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 RAD23AP54725 363 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 ARSFP54793 590 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 GTF2H3Q13889 308 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 RFTN2Q52LD8 501 aaPredicted RBP14.22□□□□□ -0.13
CPSF7-201ENST00000340437 CD300LGQ6UXG3 332 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 SNX19Q92543 992 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 BTN2A3PQ96KV6 586 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 ZNF599Q96NL3 588 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 TSPAN18Q96SJ8 248 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 INVSQ9Y283 1065 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 COQ6Q9Y2Z9 468 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 SLC30A1Q9Y6M5 507 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 BRCA1P38398 1863 aaKnown RBP14.22□□□□□ -0.13
CPSF7-201ENST00000340437 F5H5T6 163 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 G3V2T6 193 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 PKMP14618 531 aaKnown RBP14.22□□□□□ -0.13
CPSF7-201ENST00000340437 CBX3Q13185 183 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 DENND1CQ8IV53 801 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 CROCCP3Q8IVE0 287 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 CLDN19Q8N6F1 224 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 PACRGLQ8N7B6 248 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 CCDC97Q96F63 343 aaPredicted RBP14.22□□□□□ -0.13
CPSF7-201ENST00000340437 FARSBQ9NSD9 589 aaKnown RBP14.22□□□□□ -0.13
CPSF7-201ENST00000340437 TRMT13Q9NUP7 481 aaKnown RBP14.22□□□□□ -0.13
CPSF7-201ENST00000340437 INTS10Q9NVR2 710 aaKnown RBP14.22□□□□□ -0.13
CPSF7-201ENST00000340437 KLQ9UEF7 1012 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 PCTPQ9UKL6 214 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 ST14Q9Y5Y6 855 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 OTOFQ9HC10 1997 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 LOC285095A0A1B0GVY8 99 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 FAM155AB1AL88 458 aaPredicted RBP14.21□□□□□ -0.13
CPSF7-201ENST00000340437 NDST3O95803 873 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 IL10RBQ08334 325 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 VAC14Q08AM6 782 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 RCAN2Q14206 197 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 PDCD11Q14690 1871 aaKnown RBP14.21□□□□□ -0.13
CPSF7-201ENST00000340437 TGFBIQ15582 683 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 MAPK11Q15759 364 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 SLC14A2Q15849 920 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 CYP20A1Q6UW02 462 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 USP50Q70EL3 339 aaPredicted RBP14.21□□□□□ -0.13
CPSF7-201ENST00000340437 LRRC49Q8IUZ0 686 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 CCDC117Q8IWD4 279 aaPredicted RBP14.21□□□□□ -0.13
CPSF7-201ENST00000340437 ITFG2Q969R8 447 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 NRBF2Q96F24 287 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 LRRC3Q9BY71 257 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 ATP13A1Q9HD20 1204 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 ZFP37Q9Y6Q3 630 aaPredicted RBP14.21□□□□□ -0.13
CPSF7-201ENST00000340437 CNTRLQ7Z7A1 2325 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 XPNPEP2O43895 674 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 ERVK-8P63133 956 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 IL5RAQ01344 420 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 NFATC3Q12968 1075 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 SPIDRQ14159 915 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 SIM2Q14190 667 aaPredicted RBP14.21□□□□□ -0.13
CPSF7-201ENST00000340437 FAM174BQ3ZCQ3 159 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 ANKRD26P1Q6NSI1 321 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 SPATA19Q7Z5L4 167 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 SPRED1Q7Z699 444 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 HID1Q8IV36 788 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 C8orf59Q8N0T1 100 aaPredicted RBP14.21□□□□□ -0.13
CPSF7-201ENST00000340437 CENPSQ8N2Z9 138 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 KLHL23Q8NBE8 558 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 ZNF555Q8NEP9 628 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 FRS2Q8WU20 508 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 BORCS5Q969J3 196 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 SMPD4Q9NXE4 827 aa14.21□□□□□ -0.13
CPSF7-201ENST00000340437 TBC1D4O60343 1298 aa14.21□□□□□ -0.14
CPSF7-201ENST00000340437 SH3BGRLO75368 114 aa14.21□□□□□ -0.14
CPSF7-201ENST00000340437 DIRAS1O95057 198 aa14.21□□□□□ -0.14
CPSF7-201ENST00000340437 LRATO95237 230 aa14.21□□□□□ -0.14
CPSF7-201ENST00000340437 ANXA6P08133 673 aa14.21□□□□□ -0.14
CPSF7-201ENST00000340437 ELNP15502 786 aa14.21□□□□□ -0.14
CPSF7-201ENST00000340437 DUSP4Q13115 394 aa14.21□□□□□ -0.14
CPSF7-201ENST00000340437 ABRAXAS2Q15018 415 aa14.21□□□□□ -0.14
CPSF7-201ENST00000340437 BROXQ5VW32 411 aa14.21□□□□□ -0.14
CPSF7-201ENST00000340437 AFMIDQ63HM1 303 aa14.21□□□□□ -0.14
CPSF7-201ENST00000340437 PTRHD1Q6GMV3 140 aaKnown RBP14.21□□□□□ -0.14
CPSF7-201ENST00000340437 Q6ZSR9 355 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms