RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 LDB1Q86U70 411 aaPredicted RBP14.98□□□□□ -0.01
UBE3B-201ENST00000340074 CCNJLQ8IV13 435 aa14.98□□□□□ -0.01
UBE3B-201ENST00000340074 OR2L2Q8NH16 312 aa14.98□□□□□ -0.01
UBE3B-201ENST00000340074 SNF8Q96H20 258 aa14.98□□□□□ -0.01
UBE3B-201ENST00000340074 SIGLEC10Q96LC7 697 aa14.98□□□□□ -0.01
UBE3B-201ENST00000340074 LINC00615Q96LM1 132 aaPredicted RBP14.98□□□□□ -0.01
UBE3B-201ENST00000340074 FCRL3Q96P31 734 aaPredicted RBP14.98□□□□□ -0.01
UBE3B-201ENST00000340074 MARCH4Q9P2E8 410 aaPredicted RBP14.98□□□□□ -0.01
UBE3B-201ENST00000340074 ANAPC5Q9UJX4 755 aa14.98□□□□□ -0.01
UBE3B-201ENST00000340074 WDR37Q9Y2I8 494 aa14.98□□□□□ -0.01
UBE3B-201ENST00000340074 MSRB2Q9Y3D2 182 aa14.98□□□□□ -0.01
UBE3B-201ENST00000340074 MAD1L1Q9Y6D9 718 aa14.98□□□□□ -0.01
UBE3B-201ENST00000340074 PRSS21Q9Y6M0 314 aa14.98□□□□□ -0.01
UBE3B-201ENST00000340074 KIR2DS5A0A0G2JLQ3 304 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 A0A0G2JNG1 304 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 FAM237BA0A1B0GVD1 139 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 A0A1W2PQM1 296 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 OR5K4A6NMS3 321 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 EFCAB8A8MWE9 144 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 KIR2DS3K7RE56 304 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 RAD51CO43502 376 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 OR1I1O60431 355 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 MT-CO3P00414 261 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 RPLP0P05388 317 aaKnown RBP14.97□□□□□ -0.01
UBE3B-201ENST00000340074 BRAFP15056 766 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 ALDH4A1P30038 563 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 ITGA8P53708 1063 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 OR1D5P58170 312 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 HHEXQ03014 270 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 KIR2DS5Q14953 304 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 CLCA4Q14CN2 919 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 AGAP9Q5VTM2 703 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 METRNLQ641Q3 311 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 HIBCHQ6NVY1 386 aaPredicted RBP14.97□□□□□ -0.01
UBE3B-201ENST00000340074 WASH2PQ6VEQ5 465 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 CERS6Q6ZMG9 384 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 CCNI2Q6ZMN8 369 aaPredicted RBP14.97□□□□□ -0.01
UBE3B-201ENST00000340074 MAATS1Q7Z4T9 603 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 ZNF761Q86XN6 746 aaPredicted RBP14.97□□□□□ -0.01
UBE3B-201ENST00000340074 ZNF669Q96BR6 464 aaPredicted RBP14.97□□□□□ -0.01
UBE3B-201ENST00000340074 TTC1Q99614 292 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 LRRN3Q9H3W5 708 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 SARS2Q9NP81 518 aaKnown RBP14.97□□□□□ -0.01
UBE3B-201ENST00000340074 WASH6PQ9NQA3 447 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 ZNF624Q9P2J8 865 aaPredicted RBP14.97□□□□□ -0.01
UBE3B-201ENST00000340074 CPNE7Q9UBL6 633 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 PSMD13Q9UNM6 376 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 CEP295Q9C0D2 2601 aa14.97□□□□□ -0.01
UBE3B-201ENST00000340074 OR52A4PA6NMU1 304 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 GOLGA8KD6RF30 607 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 GOLGA8TH3BQL2 631 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 KIF2AO00139 706 aaPredicted RBP14.96□□□□□ -0.01
UBE3B-201ENST00000340074 NTN3O00634 580 aaPredicted RBP14.96□□□□□ -0.01
UBE3B-201ENST00000340074 B4GAT1O43505 415 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 BANF1O75531 89 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 SEC31AO94979 1220 aaKnown RBP14.96□□□□□ -0.01
UBE3B-201ENST00000340074 TUBB4AP04350 444 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 XRCC1P18887 633 aaPredicted RBP14.96□□□□□ -0.01
UBE3B-201ENST00000340074 PAMP19021 973 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 GPR3P46089 330 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 RPL21P46778 160 aaKnown RBP14.96□□□□□ -0.01
UBE3B-201ENST00000340074 ARCN1P48444 511 aaKnown RBP14.96□□□□□ -0.01
UBE3B-201ENST00000340074 CKAP4Q07065 602 aaKnown RBP14.96□□□□□ -0.01
UBE3B-201ENST00000340074 SPIDRQ14159 915 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 NR1D2Q14995 579 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 ANKRD20A4Q4UJ75 823 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 MSS51Q4VC12 460 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 AARS2Q5JTZ9 985 aaKnown RBP14.96□□□□□ -0.01
UBE3B-201ENST00000340074 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.96□□□□□ -0.01
UBE3B-201ENST00000340074 KIAA0930Q6ICG6 404 aaPredicted RBP14.96□□□□□ -0.01
UBE3B-201ENST00000340074 XKR5Q6UX68 686 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 TMEM135Q86UB9 458 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 SLC9B2Q86UD5 537 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 CFAP206Q8IYR0 622 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 LILRA3Q8N6C8 439 aaPredicted RBP14.96□□□□□ -0.01
UBE3B-201ENST00000340074 OTUD6BQ8N6M0 293 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 DCBLD1Q8N8Z6 715 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 WDR48Q8TAF3 677 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 PWWP2AQ96N64 755 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 CCM2Q9BSQ5 444 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 IL1RAPL1Q9NZN1 696 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 SNX24Q9Y343 169 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 RPS6KL1Q9Y6S9 549 aa14.96□□□□□ -0.01
UBE3B-201ENST00000340074 KLHL33A6NCF5 533 aa14.95□□□□□ -0.02
UBE3B-201ENST00000340074 FAM187AA6NFU0 413 aa14.95□□□□□ -0.02
UBE3B-201ENST00000340074 TP73O15350 636 aa14.95□□□□□ -0.02
UBE3B-201ENST00000340074 TCEA3O75764 348 aa14.95□□□□□ -0.02
UBE3B-201ENST00000340074 USP1O94782 785 aa14.95□□□□□ -0.02
UBE3B-201ENST00000340074 AP2A2O94973 939 aa14.95□□□□□ -0.02
UBE3B-201ENST00000340074 PPARGP37231 505 aaPredicted RBP14.95□□□□□ -0.02
UBE3B-201ENST00000340074 SLC19A1P41440 591 aa14.95□□□□□ -0.02
UBE3B-201ENST00000340074 HALP42357 657 aa14.95□□□□□ -0.02
UBE3B-201ENST00000340074 TTPAP49638 278 aa14.95□□□□□ -0.02
UBE3B-201ENST00000340074 UBE2IP63279 158 aaKnown RBP14.95□□□□□ -0.02
UBE3B-201ENST00000340074 DHX9Q08211 1270 aaKnown RBP14.95□□□□□ -0.02
UBE3B-201ENST00000340074 WHAMMP3Q1A5X7 153 aa14.95□□□□□ -0.02
UBE3B-201ENST00000340074 RBM44Q6ZP01 1051 aaKnown RBP14.95□□□□□ -0.02
UBE3B-201ENST00000340074 CACTIN-AS1Q8N1I8 211 aa14.95□□□□□ -0.02
UBE3B-201ENST00000340074 HM13Q8TCT9 377 aa14.95□□□□□ -0.02
UBE3B-201ENST00000340074 STAMBPL1Q96FJ0 436 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms