RNA–Protein interactions for RNA: ENST00000339844.6

ZNF28-201, Transcript of zinc finger protein 28, humanhuman

TSL 4 BASIC

Gene ZNF28, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-201ENST00000339844 BHLHA9Q7RTU4 235 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 EFL1Q7Z2Z2 1120 aaKnown RBP6.3□□□□□ -1.4
ZNF28-201ENST00000339844 SCD5Q86SK9 330 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 DHFR2Q86XF0 187 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 CMTM8Q8IZV2 173 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 CENPLQ8N0S6 344 aaPredicted RBP6.3□□□□□ -1.4
ZNF28-201ENST00000339844 CHCHD4Q8N4Q1 142 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 METTL25Q8N6Q8 603 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 ARL14EPQ8N8R7 260 aaPredicted RBP6.3□□□□□ -1.4
ZNF28-201ENST00000339844 PDPRQ8NCN5 879 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 PAPD5Q8NDF8 572 aaKnown RBP6.3□□□□□ -1.4
ZNF28-201ENST00000339844 HIPK4Q8NE63 616 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 CLEC4CQ8WTT0 213 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 GAB3Q8WWW8 586 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 TFAP2CQ92754 450 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 USP13Q92995 863 aaPredicted RBP6.3□□□□□ -1.4
ZNF28-201ENST00000339844 PMEPA1Q969W9 287 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 ELSPBP1Q96BH3 223 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 FAM149B1Q96BN6 582 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 NXNL1Q96CM4 212 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 L3HYPDHQ96EM0 354 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 MFSD3Q96ES6 412 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 SGF29Q96ES7 293 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 RMND5BQ96G75 393 aaPredicted RBP6.3□□□□□ -1.4
ZNF28-201ENST00000339844 CNBD2Q96M20 576 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 FAM129BQ96TA1 746 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 TCF12Q99081 682 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 AGAP2Q99490 1192 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 PRPF18Q99633 342 aaKnown RBP6.3□□□□□ -1.4
ZNF28-201ENST00000339844 DOK1Q99704 481 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 SLC30A3Q99726 388 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 C9orf16Q9BUW7 83 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 MLPHQ9BV36 600 aaPredicted RBP6.3□□□□□ -1.4
ZNF28-201ENST00000339844 MAGEB5Q9BZ81 275 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 OSBPL6Q9BZF3 934 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 RNF38Q9H0F5 515 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 WDCPQ9H6R7 721 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 CATSPERBQ9H7T0 1116 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 NMUR1Q9HB89 426 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 TRPV4Q9HBA0 871 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 POPDC3Q9HBV1 291 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 ZFP14Q9HCL3 533 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 PALMDQ9NP74 551 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 SPAG4Q9NPE6 437 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 CHRAC1Q9NRG0 131 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 OSER1Q9NX31 292 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 GALNT8Q9NY28 637 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 TRPM5Q9NZQ8 1165 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 ITGB1BP2Q9UKP3 347 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 DUSP12Q9UNI6 340 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 SCML2Q9UQR0 700 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 RNF11Q9Y3C5 154 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 TCAF1Q9Y4C2 921 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 TRAF6Q9Y4K3 522 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 DENND4CQ5VZ89 1909 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 ANAPC1Q9H1A4 1944 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 F5P12259 2224 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 COL4A3Q01955 1670 aa6.3□□□□□ -1.4
ZNF28-201ENST00000339844 PATJQ8NI35 1801 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 TRAV19A0A0A6YYK7 116 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 A0A1B0GVG6 124 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 A0A1W2PQH9 124 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 SH3PXD2BA1X283 911 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 C7orf72A4D263 438 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 CCDC160A6NGH7 325 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 IFRD1O00458 451 aaPredicted RBP6.29□□□□□ -1.4
ZNF28-201ENST00000339844 SCAMP3O14828 347 aaKnown RBP6.29□□□□□ -1.4
ZNF28-201ENST00000339844 SLC7A4O43246 635 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 COCHO43405 550 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 HTRA2O43464 458 aaPredicted RBP6.29□□□□□ -1.4
ZNF28-201ENST00000339844 PFDN1O60925 122 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 CBFA2T3O75081 653 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 TNFRSF21O75509 655 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 ZMPSTE24O75844 475 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 DNAJB5O75953 348 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 SRP72O76094 671 aaKnown RBP6.29□□□□□ -1.4
ZNF28-201ENST00000339844 OR6B1O95007 311 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 TBX18O95935 607 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 PDGFBP01127 241 aaPredicted RBP6.29□□□□□ -1.4
ZNF28-201ENST00000339844 FYNP06241 537 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 CHRNGP07510 517 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 USP17L7P0C7H9 530 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 SRFP11831 508 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 IDO1P14902 403 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 ZNF12P17014 697 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 JUNBP17275 347 aaPredicted RBP6.29□□□□□ -1.4
ZNF28-201ENST00000339844 HDCP19113 662 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 CES1P23141 567 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 FASP25445 335 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 DDX6P26196 483 aaKnown RBP eCLIP6.29□□□□□ -1.4
ZNF28-201ENST00000339844 GABRB3P28472 473 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 HOXC13P31276 330 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 SLC5A2P31639 672 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 AVPR1AP37288 418 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 MAGEA8P43361 318 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 STX1BP61266 288 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 ATP6V0D1P61421 351 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 CDKL1Q00532 357 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 IRF9Q00978 393 aa6.29□□□□□ -1.4
ZNF28-201ENST00000339844 PRKCQQ04759 706 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms