RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 ZNF597Q96LX8 424 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 EFHD1Q9BUP0 239 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 LRRC3Q9BY71 257 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 SLC2A11Q9BYW1 496 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 HCFC1R1Q9NWW0 138 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 ABCD2Q9UBJ2 740 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 CNOT11Q9UKZ1 510 aaKnown RBP16.12■□□□□ 0.17
LITAF-201ENST00000339430 SAC3D1A6NKF1 404 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 OR4F21O95013 312 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 MATN4O95460 622 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 CYBBP04839 570 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 SLC6A2P23975 617 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 RPL5P46777 297 aaKnown RBP16.12■□□□□ 0.17
LITAF-201ENST00000339430 TTPAP49638 278 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 IL2P60568 153 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 UFM1P61960 85 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 CYP4F8P98187 520 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 SLC5A9Q2M3M2 681 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 C18orf21Q32NC0 220 aaPredicted RBP16.12■□□□□ 0.17
LITAF-201ENST00000339430 HABP4Q5JVS0 413 aaKnown RBP16.12■□□□□ 0.17
LITAF-201ENST00000339430 TBCELQ5QJ74 424 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 ATXN7L2Q5T6C5 722 aaPredicted RBP16.12■□□□□ 0.17
LITAF-201ENST00000339430 GPSM1Q86YR5 675 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 CDYL2Q8N8U2 506 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 CCDC97Q96F63 343 aaPredicted RBP16.12■□□□□ 0.17
LITAF-201ENST00000339430 HBEGFQ99075 208 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 TMEM79Q9BSE2 394 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 ADGRE3Q9BY15 652 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 MRPS26Q9BYN8 205 aaKnown RBP16.12■□□□□ 0.17
LITAF-201ENST00000339430 ZNF696Q9H7X3 374 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 RNF11Q9Y3C5 154 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 PCDHB9Q9Y5E1 797 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 MTCL1Q9Y4B5 1905 aaKnown RBP16.11■□□□□ 0.17
LITAF-201ENST00000339430 SMIM31A0A1B0GVY4 71 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 SOCS2O14508 198 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 ESRRBO95718 433 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 GJA1P17302 382 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 RABL3Q5HYI8 236 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 PAGE3Q5JUK9 113 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 ADGRF1Q5T601 910 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 ZBTB49Q6ZSB9 765 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 ADGRD2Q7Z7M1 963 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 CHERPQ8IWX8 916 aaKnown RBP16.11■□□□□ 0.17
LITAF-201ENST00000339430 MINDY1Q8N5J2 469 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 ARL14EPQ8N8R7 260 aaPredicted RBP16.11■□□□□ 0.17
LITAF-201ENST00000339430 OR52B6Q8NGF0 335 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 OR6K2Q8NGY2 324 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 PLD4Q96BZ4 506 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 DUS3LQ96G46 650 aaKnown RBP16.11■□□□□ 0.17
LITAF-201ENST00000339430 PLEKHG4BQ96PX9 1271 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 SLC28A3Q9HAS3 691 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 ASAH2Q9NR71 780 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 FCF1Q9Y324 198 aaKnown RBP16.11■□□□□ 0.17
LITAF-201ENST00000339430 A0A1W2PRU2 124 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 ASPDHA6ND91 283 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 NRG2O14511 850 aaPredicted RBP16.11■□□□□ 0.17
LITAF-201ENST00000339430 GIPC1O14908 333 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 ALPIP09923 528 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 UROSP10746 265 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 MBL2P11226 248 aaPredicted RBP16.11■□□□□ 0.17
LITAF-201ENST00000339430 MTHFD1P11586 935 aaKnown RBP16.11■□□□□ 0.17
LITAF-201ENST00000339430 KCNK10P57789 538 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 PRKCQQ04759 706 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 NFYCQ13952 458 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 RAB30Q15771 203 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 ZNF697Q5TEC3 545 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 PDE12Q6L8Q7 609 aaKnown RBP16.11■□□□□ 0.17
LITAF-201ENST00000339430 NCSTNQ92542 709 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 UHRF1Q96T88 793 aaPredicted RBP16.11■□□□□ 0.17
LITAF-201ENST00000339430 SLC52A3Q9NQ40 469 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 GID8Q9NWU2 228 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 SLAMF8Q9P0V8 285 aa16.11■□□□□ 0.17
LITAF-201ENST00000339430 DHRS12A0PJE2 317 aa16.1■□□□□ 0.17
LITAF-201ENST00000339430 H0Y626 953 aa16.1■□□□□ 0.17
LITAF-201ENST00000339430 PLOD2O00469 737 aa16.1■□□□□ 0.17
LITAF-201ENST00000339430 STX16O14662 325 aa16.1■□□□□ 0.17
LITAF-201ENST00000339430 CHEK2O96017 543 aa16.1■□□□□ 0.17
LITAF-201ENST00000339430 NCK1P16333 377 aa16.1■□□□□ 0.17
LITAF-201ENST00000339430 ITGB6P18564 788 aa16.1■□□□□ 0.17
LITAF-201ENST00000339430 OXTRP30559 389 aa16.1■□□□□ 0.17
LITAF-201ENST00000339430 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.1■□□□□ 0.17
LITAF-201ENST00000339430 PRMT9Q6P2P2 845 aa16.1■□□□□ 0.17
LITAF-201ENST00000339430 TTC30BQ8N4P2 665 aa16.1■□□□□ 0.17
LITAF-201ENST00000339430 MRPS31Q92665 395 aaKnown RBP16.1■□□□□ 0.17
LITAF-201ENST00000339430 SH3GL3Q99963 347 aa16.1■□□□□ 0.17
LITAF-201ENST00000339430 KLF16Q9BXK1 252 aaPredicted RBP16.1■□□□□ 0.17
LITAF-201ENST00000339430 PIF1Q9H611 641 aa16.1■□□□□ 0.17
LITAF-201ENST00000339430 AIG1Q9NVV5 245 aa16.1■□□□□ 0.17
LITAF-201ENST00000339430 HCFC2Q9Y5Z7 792 aa16.1■□□□□ 0.17
LITAF-201ENST00000339430 DOCK6Q96HP0 2047 aa16.1■□□□□ 0.17
LITAF-201ENST00000339430 OBSL1O75147 1896 aa16.1■□□□□ 0.17
LITAF-201ENST00000339430 CROCCQ5TZA2 2017 aa16.1■□□□□ 0.17
LITAF-201ENST00000339430 EPOPA6NHQ4 379 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 PDLIM1O00151 329 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 E2F3O00716 465 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 VILLO15195 856 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 TBL1XO60907 577 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 VPS4BO75351 444 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 NCEH1Q6PIU2 408 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 GPRIN3Q6ZVF9 776 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms