RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 HCN2Q9UL51 889 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 IGLV3-16A0A075B6K0 115 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 EDDM13A0A1B0GTR0 161 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 STX16-NPEPL1H3BU86 382 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 STX16O14662 325 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 PRNPP04156 253 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 COX4I1P13073 169 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 PSMC3P17980 439 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 PIK3R1P27986 724 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 GDI1P31150 447 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 PGM1P36871 562 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 IL12RB1P42701 662 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 EIF4HQ15056 248 aaKnown RBP22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 ERAP2Q6P179 960 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 ADAMTSL2Q86TH1 951 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 AGAP11Q8TF27 550 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 OR8D1Q8WZ84 308 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 CMTM5Q96DZ9 223 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 FAM129BQ96TA1 746 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 TMEM245Q9H330 911 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 CACNA2D2Q9NY47 1150 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 PPM1HQ9ULR3 514 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 TIMM22Q9Y584 194 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 COPG1Q9Y678 874 aaKnown RBP22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 COL4A3Q01955 1670 aa22.09■■□□□ 1.13
PDLIM2-203ENST00000339162 AZIN1O14977 448 aa22.09■■□□□ 1.13
PDLIM2-203ENST00000339162 SPINT1O43278 529 aa22.09■■□□□ 1.13
PDLIM2-203ENST00000339162 HSPA14Q0VDF9 509 aa22.09■■□□□ 1.13
PDLIM2-203ENST00000339162 SNCBQ16143 134 aa22.09■■□□□ 1.13
PDLIM2-203ENST00000339162 HENMT1Q5T8I9 393 aaKnown RBP22.09■■□□□ 1.13
PDLIM2-203ENST00000339162 CACUL1Q86Y37 369 aa22.09■■□□□ 1.13
PDLIM2-203ENST00000339162 BEND7Q8N7W2 519 aaPredicted RBP22.09■■□□□ 1.13
PDLIM2-203ENST00000339162 HGH1Q9BTY7 390 aa22.09■■□□□ 1.13
PDLIM2-203ENST00000339162 FBRSL1Q9HCM7 1045 aaKnown RBP22.09■■□□□ 1.13
PDLIM2-203ENST00000339162 KIF26AQ9ULI4 1882 aaPredicted RBP22.09■■□□□ 1.13
PDLIM2-203ENST00000339162 FFAR2O15552 330 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 OR56A5P0C7T3 313 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 LAMP2P13473 410 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 ATP1B2P14415 290 aaPredicted RBP22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 GM2AP17900 193 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 CPOXP36551 454 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 SOX9P48436 509 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 RBBP7Q16576 425 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 CES5AQ6NT32 575 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 FBXL19Q6PCT2 694 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 TXNDC11Q6PKC3 985 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 TECPR1Q7Z6L1 1165 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 MMAAQ8IVH4 418 aaKnown RBP22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 C19orf60Q96EN9 201 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 ASB2Q96Q27 587 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 THTPAQ9BU02 230 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 DENND2DQ9H6A0 471 aaPredicted RBP22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 ZNF385DQ9H6B1 395 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 FAM8A1Q9UBU6 413 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 GIMAP2Q9UG22 337 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 ZNF225Q9UK10 706 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 BTRCQ9Y297 605 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 E2F3O00716 465 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 TBX10O75333 385 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 KAT7O95251 611 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 EPHX1P07099 455 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 NFKBIAP25963 317 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 WASP42768 502 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 CREB5Q02930 508 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 ADAM15Q13444 863 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 ELAVL3Q14576 367 aaKnown RBP22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 SYVN1Q86TM6 617 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 SNX31Q8N9S9 440 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 ZNF483Q8TF39 744 aaPredicted RBP22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 TWIST2Q8WVJ9 160 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 DCUN1D1Q96GG9 259 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 CDK15Q96Q40 435 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 PANX3Q96QZ0 392 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 FAM126AQ9BYI3 521 aaPredicted RBP22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 NUDT4Q9NZJ9 180 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 SUN2Q9UH99 717 aa22.08■■□□□ 1.13
PDLIM2-203ENST00000339162 OR2AG2A6NM03 316 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 PIP5K1BO14986 540 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 CUL3Q13618 768 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 BOP1Q14137 746 aaKnown RBP22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 EGFLAMQ63HQ2 1017 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 MBOAT1Q6ZNC8 495 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 DDIASQ8IXT1 998 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 PELI3Q8N2H9 469 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 HCAR2Q8TDS4 363 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 SUSD6Q92537 303 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 S1PR5Q9H228 398 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 TUBB1Q9H4B7 451 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 INPP4BO15327 924 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 ENTPD5O75356 428 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 FGF4P08620 206 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 INHBCP55103 352 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 DCDC1P59894 354 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 SATB1Q01826 763 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 RIPK1Q13546 671 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 ZNF284Q2VY69 593 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 TTLL9Q3SXZ7 439 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 KANK2Q63ZY3 851 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 SNX32Q86XE0 403 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 VRK3Q8IV63 474 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms