RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 ALDH7A1P49419 539 aaKnown RBP13.11□□□□□ -0.31
COL2A1-201ENST00000337299 RENBPP51606 427 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 PTPN5P54829 565 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 IL2P60568 153 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 UFM1P61960 85 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 TMEM132BQ14DG7 1078 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 PLEKHG6Q3KR16 790 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 AADATQ8N5Z0 425 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 ANKFN1Q8N957 763 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 LPCAT1Q8NF37 534 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 B3GALT6Q96L58 329 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 CLPBQ9H078 707 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 TMEM134Q9H6X4 195 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 CCDC177Q9NQR7 707 aaPredicted RBP13.11□□□□□ -0.31
COL2A1-201ENST00000337299 CATSPERZQ9NTU4 200 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 DUX4Q9UBX2 424 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 FAM172BPA6NC97 362 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 FABP12A6NFH5 140 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 CXCR6O00574 342 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 RFXANKO14593 260 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 CHRNA1P02708 482 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 MYCLP1P12525 358 aaPredicted RBP13.11□□□□□ -0.31
COL2A1-201ENST00000337299 INSRRP14616 1297 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 AGXTP21549 392 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 BTBD16Q32M84 506 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 TIGD4Q8IY51 512 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 CACTIN-AS1Q8N1I8 211 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 SELENOMQ8WWX9 145 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 FBXL18Q96ME1 805 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 CDK15Q96Q40 435 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 PANX1Q96RD7 426 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 SEZ6LQ9BYH1 1024 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 TAS2R9Q9NYW1 312 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 RGS17Q9UGC6 210 aaPredicted RBP13.11□□□□□ -0.31
COL2A1-201ENST00000337299 SLC2A6Q9UGQ3 507 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 CDV3Q9UKY7 258 aaKnown RBP13.11□□□□□ -0.31
COL2A1-201ENST00000337299 VPS4AQ9UN37 437 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 IFT52Q9Y366 437 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 CORINQ9Y5Q5 1042 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 ULK1O75385 1050 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 BDNFP23560 247 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 ADRA1BP35368 520 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 ATP12AP54707 1039 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 ATP6V0D1P61421 351 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 JAG1P78504 1218 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 SPIBQ01892 262 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 FAM174BQ3ZCQ3 159 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 RNF111Q6ZNA4 994 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 PTCHD4Q6ZW05 846 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 USP43Q70EL4 1123 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 ITCHQ96J02 903 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 SLC45A3Q96JT2 553 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 OR2B2Q9GZK3 357 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 DSN1Q9H410 356 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 ABI2Q9NYB9 513 aaPredicted RBP13.11□□□□□ -0.31
COL2A1-201ENST00000337299 MOCS1Q9NZB8 636 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 LRFN2Q9ULH4 789 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 DNMT3AQ9Y6K1 912 aaPredicted RBP13.11□□□□□ -0.31
COL2A1-201ENST00000337299 MYO9BQ13459 2157 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 NPEPPSL1A6NEC2 478 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 NME4O00746 187 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 MT-ND2P03891 347 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 CYP3A5P20815 502 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 CRATP43155 626 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 WNT7BP56706 349 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 NOMO2Q5JPE7 1267 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 CARM1Q86X55 608 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 HS3ST5Q8IZT8 346 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 WDTC1Q8N5D0 677 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 BPIFA1Q9NP55 256 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 CLN6Q9NWW5 311 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 CNOT11Q9UKZ1 510 aaKnown RBP13.1□□□□□ -0.31
COL2A1-201ENST00000337299 TMEM98Q9Y2Y6 226 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 UGT2A1Q9Y4X1 527 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 GRID2O43424 1007 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 SERPIND1P05546 499 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 DNAJB2P25686 324 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 RFC2P35250 354 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 FEN1P39748 380 aaKnown RBP13.1□□□□□ -0.31
COL2A1-201ENST00000337299 ASPAP45381 313 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 MAVSQ7Z434 540 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 TMEM192Q8IY95 271 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 DCP1BQ8IZD4 617 aaKnown RBP13.1□□□□□ -0.31
COL2A1-201ENST00000337299 TMEM203Q969S6 136 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 MYLPFQ96A32 169 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 EFHD2Q96C19 240 aaPredicted RBP13.1□□□□□ -0.31
COL2A1-201ENST00000337299 ALPK1Q96QP1 1244 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 OSMRQ99650 979 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 INIPQ9NRY2 104 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 COMMD3Q9UBI1 195 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 TESMINQ9Y4I5 508 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 A0A1W2PRG6 482 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 ANKRD34BA5PLL1 514 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 CASKO14936 926 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 NUAK1O60285 661 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 MLYCDO95822 493 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 PSMA1P25786 263 aaKnown RBP13.1□□□□□ -0.31
COL2A1-201ENST00000337299 TIE1P35590 1138 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 PPP5CP53041 499 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 OLR1P78380 273 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms