RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ITPKAP23677 461 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 KLRK1P26718 216 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 GNG2P59768 71 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 CDKL4Q5MAI5 379 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 UBAP2Q5T6F2 1119 aaKnown RBP9.71□□□□□ -0.85
COL4A6-201ENST00000334504 OR5J2Q8NH18 312 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 C10orf82Q8WW14 230 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 PFDN5Q99471 154 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 C3orf14Q9HBI5 128 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 GULP1Q9UBP9 304 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 ST14Q9Y5Y6 855 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 SPIN1Q9Y657 262 aaPredicted RBP9.71□□□□□ -0.85
COL4A6-201ENST00000334504 RBM47A0AV96 593 aaKnown RBP9.71□□□□□ -0.86
COL4A6-201ENST00000334504 GMFGO60234 142 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 TPST2O60704 377 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 TFPTP0C1Z6 253 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 ZNF14P17017 642 aaPredicted RBP9.71□□□□□ -0.86
COL4A6-201ENST00000334504 RGS19P49795 217 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 MCCD1P59942 119 aaPredicted RBP9.71□□□□□ -0.86
COL4A6-201ENST00000334504 VMACQ2NL98 169 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 UBE2R2Q712K3 238 aaPredicted RBP9.71□□□□□ -0.86
COL4A6-201ENST00000334504 TMEM17Q86X19 198 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 OR5T3Q8NGG3 340 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 CD300LFQ8TDQ1 290 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 TCF7L1Q9HCS4 588 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 DNAJB9Q9UBS3 223 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 PREX2Q70Z35 1606 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 DCLK1O15075 740 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 SCGB1D2O95969 90 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 RAP2AP10114 183 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 PGDP52209 483 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 LIMK2P53671 638 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 PPP4CP60510 307 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 TGFBIQ15582 683 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 ASCC1Q8N9N2 400 aaKnown RBP9.71□□□□□ -0.86
COL4A6-201ENST00000334504 GMCL1P1Q8NEA9 526 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 PIWIL1Q96J94 861 aaKnown RBP9.71□□□□□ -0.86
COL4A6-201ENST00000334504 CRAMP1Q96RY5 1269 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 ITPAQ9BY32 194 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 AGXT2Q9BYV1 514 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 COMMD4Q9H0A8 199 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 PCDHAC1Q9H158 963 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 TRPS1Q9UHF7 1281 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 PADI2Q9Y2J8 665 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 CLTCQ00610 1675 aaKnown RBP9.71□□□□□ -0.86
COL4A6-201ENST00000334504 CETPP11597 493 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 IL1R1P14778 569 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 PPP3R1P63098 170 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 NOMO3P69849 1222 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 LY6KQ17RY6 165 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 XKR5Q6UX68 686 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 LIX1Q8N485 282 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 PIGXQ8TBF5 258 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 XAGE5Q8WWM1 108 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 MTMR10Q9NXD2 777 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 MAB21L2Q9Y586 359 aa9.71□□□□□ -0.86
COL4A6-201ENST00000334504 BOLA2-SMG1P6H3BVE0 249 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 XKRYO14609 159 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 KLRC4O43908 158 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 MTHFD1P11586 935 aaKnown RBP9.7□□□□□ -0.86
COL4A6-201ENST00000334504 ARCN1P48444 511 aaKnown RBP9.7□□□□□ -0.86
COL4A6-201ENST00000334504 PSEN1P49768 467 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 ZNF829Q3KNS6 432 aaPredicted RBP9.7□□□□□ -0.86
COL4A6-201ENST00000334504 POMZP3Q6PJE2 187 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 PCDH19Q8TAB3 1148 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 GTF3C2Q8WUA4 911 aaPredicted RBP9.7□□□□□ -0.86
COL4A6-201ENST00000334504 MKL1Q969V6 931 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 KCTD7Q96MP8 289 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 METTL8Q9H825 291 aaKnown RBP9.7□□□□□ -0.86
COL4A6-201ENST00000334504 POLE4Q9NR33 117 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 PPM1HQ9ULR3 514 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 CFL2Q9Y281 166 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 NME6O75414 186 aaPredicted RBP9.7□□□□□ -0.86
COL4A6-201ENST00000334504 CYP11A1P05108 521 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 PEPDP12955 493 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 GRK1Q15835 563 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 KLHL22Q53GT1 634 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 GPR158Q5T848 1215 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 TPGS1Q6ZTW0 290 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 CRYBG2Q8N1P7 616 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 OR2L2Q8NH16 312 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 ACOT12Q8WYK0 555 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 AGAP2Q99490 1192 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 TBX5Q99593 518 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 DDX4Q9NQI0 724 aaKnown RBP9.7□□□□□ -0.86
COL4A6-201ENST00000334504 FAM105AQ9NUU6 356 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 NUDT15Q9NV35 164 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 COL6A2P12110 1019 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 LPOP22079 712 aaPredicted RBP9.7□□□□□ -0.86
COL4A6-201ENST00000334504 LCN1P31025 176 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 TUBB3Q13509 450 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 TBRG1Q3YBR2 411 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 SLC27A1Q6PCB7 646 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 FAM151BQ6UXP7 276 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 OXR1Q8N573 874 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 SMG8Q8ND04 991 aaKnown RBP9.7□□□□□ -0.86
COL4A6-201ENST00000334504 TMEM161BQ8NDZ6 487 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 THAP6Q8TBB0 222 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 STON2Q8WXE9 905 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 TCRBV7S2A1N4TA0A589 114 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms