RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 NUMBLQ9Y6R0 609 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 MYOCOSA0A1B0GUC4 107 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 STX16-NPEPL1H3BU86 382 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 KATNA1O75449 491 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 FCGR1AP12314 374 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 TPSB2P20231 275 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 SLC6A4P31645 630 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 CD70P32970 193 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 ZNF33AQ06730 810 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 TPSAB1Q15661 275 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 PUS10Q3MIT2 529 aaKnown RBP11.68□□□□□ -0.54
HDAC6-201ENST00000334136 ZNF554Q86TJ5 538 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 TAGAPQ8N103 731 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 SORCS1Q8WY21 1168 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 TXLNGYQ9BZA5 131 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 THSD7BQ9C0I4 1608 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 C6orf62Q9GZU0 229 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-201ENST00000334136 PTTG2Q9NZH5 202 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 TTC24A2A3L6 582 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-201ENST00000334136 GABBR2O75899 941 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 METTL18O95568 372 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 KLKB1P03952 638 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 PGFP49763 221 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 MCCD1P59942 119 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-201ENST00000334136 TRIM25Q14258 630 aaKnown RBP11.68□□□□□ -0.54
HDAC6-201ENST00000334136 PFKFB4Q16877 469 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 LIPMQ5VYY2 423 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 ZDHHC13Q8IUH4 622 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 MPP5Q8N3R9 675 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 HDDC3Q8N4P3 179 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 ENDOVQ8N8Q3 282 aaKnown RBP11.68□□□□□ -0.54
HDAC6-201ENST00000334136 FBXO30Q8TB52 745 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 LRCH3Q96II8 777 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 TSGA13Q96PP4 275 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 CCDC28BQ9BUN5 200 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 ARMC7Q9H6L4 198 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 ATAD3AQ9NVI7 634 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 DHRS12A0PJE2 317 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 CKMT2P17540 419 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 DDX39BQ13838 428 aaKnown RBP11.68□□□□□ -0.54
HDAC6-201ENST00000334136 SPIDRQ14159 915 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 CARTPTQ16568 116 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 MYLK3Q32MK0 819 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 MPP7Q5T2T1 576 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 GDPD4Q6W3E5 623 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 ZNF852Q6ZMS4 543 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 FRMD7Q6ZUT3 714 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 OFCC1Q8IZS5 231 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 APCDD1Q8J025 514 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 RAB42Q8N4Z0 105 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 BPIFB6Q8NFQ5 453 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 OR9Q1Q8NGQ5 310 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 LRTOMTQ8WZ04 291 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 HDAC10Q969S8 669 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 RBBP8Q99708 897 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 PCDHAC1Q9H158 963 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 IL21Q9HBE4 155 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 RAB23Q9ULC3 237 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 PNMA8BQ9ULN7 279 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-201ENST00000334136 TMEM265A0A087WTH1 108 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 MAGP20916 626 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 CDH15P55291 814 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 ADAM15Q13444 863 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 UBE2Q1Q7Z7E8 422 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 IGDCC3Q8IVU1 814 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 PHTF2Q8N3S3 785 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 ATG16L2Q8NAA4 619 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 ASB16Q96NS5 453 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 PHF7Q9BWX1 381 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-201ENST00000334136 ZDHHC4Q9NPG8 344 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 SEMA4BQ9NPR2 832 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-201ENST00000334136 CATSPERZQ9NTU4 200 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 ZNF180Q9UJW8 692 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 BTRCQ9Y297 605 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 LRRC37A2A6NM11 1700 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 TCRBV5S1A1TA0A578 114 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 CCDC189A1A4V9 331 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 LRRC72A6NJI9 287 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 H3BSA7 217 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 PON2Q15165 354 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 LSM12Q3MHD2 195 aaKnown RBP11.67□□□□□ -0.54
HDAC6-201ENST00000334136 FAM98BQ52LJ0 330 aaKnown RBP11.67□□□□□ -0.54
HDAC6-201ENST00000334136 OR4K2Q8NGD2 314 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 OR52K2Q8NGK3 314 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 MAFAQ8NHW3 353 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-201ENST00000334136 RORBQ92753 470 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 NT5C3BQ969T7 300 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 UTP4Q969X6 686 aaKnown RBP11.67□□□□□ -0.54
HDAC6-201ENST00000334136 BTBD9Q96Q07 612 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 WRAP53Q9BUR4 548 aaKnown RBP11.67□□□□□ -0.54
HDAC6-201ENST00000334136 ZC4H2Q9NQZ6 224 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 CHRAC1Q9NRG0 131 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 TRNAU1APQ9NX07 287 aaKnown RBP11.67□□□□□ -0.54
HDAC6-201ENST00000334136 PCDHGB4Q9UN71 923 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 A0A1B0GVG6 124 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 A0A1W2PPC1 479 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 EVPLLA8MZ36 301 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 CHRNGP07510 517 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 ZDHHC11BP0C7U3 371 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 ITGB6P18564 788 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms