RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 LDLRAP1Q5SW96 308 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 HID1Q8IV36 788 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 RAVER1Q8IY67 606 aaKnown RBP16.26■□□□□ 0.19
SHOX-201ENST00000334060 SPDYE1Q8NFV5 336 aaPredicted RBP16.26■□□□□ 0.19
SHOX-201ENST00000334060 OR56A4Q8NGH8 313 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 ULK4Q96C45 1275 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 KLHDC7BQ96G42 594 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 GPR22Q99680 433 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 FAM126AQ9BYI3 521 aaPredicted RBP16.26■□□□□ 0.19
SHOX-201ENST00000334060 CLPBQ9H078 707 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 CARS2Q9HA77 564 aaKnown RBP16.26■□□□□ 0.19
SHOX-201ENST00000334060 INTS10Q9NVR2 710 aaKnown RBP16.26■□□□□ 0.19
SHOX-201ENST00000334060 PRAMEF33A0A0G2JMD5 474 aa16.25■□□□□ 0.19
SHOX-201ENST00000334060 TLR4O00206 839 aa16.25■□□□□ 0.19
SHOX-201ENST00000334060 CACNB4O00305 520 aaPredicted RBP16.25■□□□□ 0.19
SHOX-201ENST00000334060 CHUKO15111 745 aa16.25■□□□□ 0.19
SHOX-201ENST00000334060 RFPL1O75677 317 aa16.25■□□□□ 0.19
SHOX-201ENST00000334060 ZNF7P17097 686 aaPredicted RBP16.25■□□□□ 0.19
SHOX-201ENST00000334060 CLCN7P51798 805 aa16.25■□□□□ 0.19
SHOX-201ENST00000334060 THOP1P52888 689 aa16.25■□□□□ 0.19
SHOX-201ENST00000334060 KIAA1024LP59773 190 aa16.25■□□□□ 0.19
SHOX-201ENST00000334060 ITIH4Q14624 930 aa16.25■□□□□ 0.19
SHOX-201ENST00000334060 SEPT7Q16181 437 aaKnown RBP16.25■□□□□ 0.19
SHOX-201ENST00000334060 CERS6Q6ZMG9 384 aa16.25■□□□□ 0.19
SHOX-201ENST00000334060 KIAA0408Q6ZU52 694 aa16.25■□□□□ 0.19
SHOX-201ENST00000334060 C4orf33Q8N1A6 199 aa16.25■□□□□ 0.19
SHOX-201ENST00000334060 PLD6Q8N2A8 252 aaKnown RBP16.25■□□□□ 0.19
SHOX-201ENST00000334060 CD200R1Q8TD46 325 aa16.25■□□□□ 0.19
SHOX-201ENST00000334060 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.25■□□□□ 0.19
SHOX-201ENST00000334060 DCUN1D1Q96GG9 259 aa16.25■□□□□ 0.19
SHOX-201ENST00000334060 WDR92Q96MX6 357 aa16.25■□□□□ 0.19
SHOX-201ENST00000334060 ARRDC1-AS1Q9H2J1 176 aa16.25■□□□□ 0.19
SHOX-201ENST00000334060 PSMC3IPQ9P2W1 217 aaPredicted RBP16.25■□□□□ 0.19
SHOX-201ENST00000334060 CHRM3P20309 590 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 FDXRP22570 491 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 PRLHRP49683 370 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 CSRP3P50461 194 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 SRP54P61011 504 aaKnown RBP16.24■□□□□ 0.19
SHOX-201ENST00000334060 BOP1Q14137 746 aaKnown RBP16.24■□□□□ 0.19
SHOX-201ENST00000334060 CACNA1EQ15878 2313 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 PYCR3Q53H96 274 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 TTMPQ5BVD1 217 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 AARS2Q5JTZ9 985 aaKnown RBP16.24■□□□□ 0.19
SHOX-201ENST00000334060 GRTP1Q5TC63 336 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 PTRHD1Q6GMV3 140 aaKnown RBP16.24■□□□□ 0.19
SHOX-201ENST00000334060 ZNF449Q6P9G9 518 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 PAQR3Q6TCH7 311 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 PCED1AQ9H1Q7 454 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 SNX15Q9NRS6 342 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 UCKL1Q9NWZ5 548 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 TXNDC16Q9P2K2 825 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 CIDEBQ9UHD4 219 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 GPSM3Q9Y4H4 160 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 DMXL1Q9Y485 3027 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 H3BMM5 538 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 H3BQF6 201 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 GRID2O43424 1007 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 TCEA3O75764 348 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 POP7O75817 140 aaKnown RBP16.24■□□□□ 0.19
SHOX-201ENST00000334060 RHOBTB1O94844 696 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 RPS3P23396 243 aaKnown RBP eCLIP16.24■□□□□ 0.19
SHOX-201ENST00000334060 RPL10P27635 214 aaKnown RBP16.24■□□□□ 0.19
SHOX-201ENST00000334060 TEAD1P28347 426 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 RABIFP47224 123 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 NXPH1P58417 271 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 USP10Q14694 798 aaKnown RBP16.24■□□□□ 0.19
SHOX-201ENST00000334060 WDR45BQ5MNZ6 344 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 MACC1Q6ZN28 852 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 CDHR3Q6ZTQ4 885 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 NRROSQ86YC3 692 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 CPNE9Q8IYJ1 553 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 TCF12Q99081 682 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 RXFP3Q9NSD7 469 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 DNAJC28Q9NX36 388 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 KLQ9UEF7 1012 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 PSMD13Q9UNM6 376 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 CDYLQ9Y232 598 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 ANKRD6Q9Y2G4 727 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 WDR37Q9Y2I8 494 aa16.24■□□□□ 0.19
SHOX-201ENST00000334060 RASGRP1O95267 797 aa16.23■□□□□ 0.19
SHOX-201ENST00000334060 WISP3O95389 354 aaPredicted RBP16.23■□□□□ 0.19
SHOX-201ENST00000334060 CFIP05156 583 aa16.23■□□□□ 0.19
SHOX-201ENST00000334060 SLC35E2BP0CK96 405 aa16.23■□□□□ 0.19
SHOX-201ENST00000334060 SHBQ15464 509 aa16.23■□□□□ 0.19
SHOX-201ENST00000334060 ACSBG2Q5FVE4 666 aa16.23■□□□□ 0.19
SHOX-201ENST00000334060 SH2D5Q6ZV89 423 aa16.23■□□□□ 0.19
SHOX-201ENST00000334060 LMNTD1Q8N9Z9 388 aa16.23■□□□□ 0.19
SHOX-201ENST00000334060 MFSD2AQ8NA29 543 aa16.23■□□□□ 0.19
SHOX-201ENST00000334060 SUMF1Q8NBK3 374 aa16.23■□□□□ 0.19
SHOX-201ENST00000334060 PATE1Q8WXA2 126 aa16.23■□□□□ 0.19
SHOX-201ENST00000334060 SLC24A2Q9UI40 661 aa16.23■□□□□ 0.19
SHOX-201ENST00000334060 ZNF180Q9UJW8 692 aa16.23■□□□□ 0.19
SHOX-201ENST00000334060 SMG5Q9UPR3 1016 aaKnown RBP16.23■□□□□ 0.19
SHOX-201ENST00000334060 VWA7Q9Y334 891 aa16.23■□□□□ 0.19
SHOX-201ENST00000334060 CFAP20Q9Y6A4 193 aaKnown RBP16.23■□□□□ 0.19
SHOX-201ENST00000334060 TSPAN12O95859 305 aa16.22■□□□□ 0.19
SHOX-201ENST00000334060 SYF2O95926 243 aaKnown RBP16.22■□□□□ 0.19
SHOX-201ENST00000334060 SPRP35270 261 aaPredicted RBP16.22■□□□□ 0.19
SHOX-201ENST00000334060 AFF3P51826 1226 aaKnown RBP16.22■□□□□ 0.19
SHOX-201ENST00000334060 BNIP3Q12983 259 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms