RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 TACR2P21452 398 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 NFKBIAP25963 317 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 MC4RP32245 332 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 ERVK-8P63133 956 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 FOXM1Q08050 763 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 ZRANB3Q5FWF4 1079 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 IL27RAQ6UWB1 636 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 DLEU7Q6UYE1 221 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 DNAJC14Q6Y2X3 702 aaPredicted RBP12.17□□□□□ -0.46
VPS33B-201ENST00000333371 SPATA19Q7Z5L4 167 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 STK32CQ86UX6 486 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 ZC3H7AQ8IWR0 971 aaKnown RBP12.17□□□□□ -0.46
VPS33B-201ENST00000333371 TBC1D21Q8IYX1 336 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 FATE1Q969F0 183 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 TMBIM1Q969X1 311 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 FBXL8Q96CD0 374 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 CAPNS2Q96L46 248 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 BRINP2Q9C0B6 783 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 SMURF2Q9HAU4 748 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 FANCEQ9HB96 536 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 PLGRKTQ9HBL7 147 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 POPDC3Q9HBV1 291 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 INTS10Q9NVR2 710 aaKnown RBP12.17□□□□□ -0.46
VPS33B-201ENST00000333371 SUN2Q9UH99 717 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 POLR3HQ9Y535 204 aaPredicted RBP12.17□□□□□ -0.46
VPS33B-201ENST00000333371 A0A1W2PQ45 241 aaPredicted RBP12.16□□□□□ -0.46
VPS33B-201ENST00000333371 A0A1W2PQY0 241 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 KCNH1O95259 989 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 ITGB6P18564 788 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 SGSHP51688 502 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 EMX2Q04743 252 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 DSC1Q08554 894 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 USP51Q70EK9 711 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 GPSM1Q86YR5 675 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 COLGALT2Q8IYK4 626 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 BPIFB6Q8NFQ5 453 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 TBC1D15Q8TC07 691 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 CD200R1Q8TD46 325 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 LINC01599Q8WXQ3 324 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 ISG20Q96AZ6 181 aaKnown RBP12.16□□□□□ -0.46
VPS33B-201ENST00000333371 NSMCE2Q96MF7 247 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 ZMYM5Q9UJ78 669 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 PCDHGA11Q9Y5H2 935 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 MKI67P46013 3256 aaKnown RBP12.16□□□□□ -0.46
VPS33B-201ENST00000333371 NOBOXO60393 691 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 CHEK2O96017 543 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 ALBP02768 609 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 FCGR1AP12314 374 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 NAA20P61599 178 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 TRAF2Q12933 501 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 NKG7Q16617 165 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 NFE2Q16621 373 aaPredicted RBP12.16□□□□□ -0.46
VPS33B-201ENST00000333371 CTXN3Q4LDR2 81 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 ATP6AP1LQ52LC2 224 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 RFTN2Q52LD8 501 aaPredicted RBP12.16□□□□□ -0.46
VPS33B-201ENST00000333371 COQ5Q5HYK3 327 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 ENPP6Q6UWR7 440 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 RSPO2Q6UXX9 243 aaPredicted RBP12.16□□□□□ -0.46
VPS33B-201ENST00000333371 LINGO4Q6UY18 593 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 FBXO30Q8TB52 745 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 GIPC3Q8TF64 312 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 ADNPQ9H2P0 1102 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 IKZF5Q9H5V7 419 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 EXD2Q9NVH0 621 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 TRMT6Q9UJA5 497 aaKnown RBP12.16□□□□□ -0.46
VPS33B-201ENST00000333371 ZNF711Q9Y462 761 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 PCDHB5Q9Y5E4 795 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 GMEB1Q9Y692 573 aa12.16□□□□□ -0.46
VPS33B-201ENST00000333371 ZFP37Q9Y6Q3 630 aaPredicted RBP12.16□□□□□ -0.46
VPS33B-201ENST00000333371 SH3PXD2BA1X283 911 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 DFNA5O60443 496 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 SNAP91O60641 907 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 OAZ2O95190 189 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 PRAMEF12O95522 483 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 INHAP05111 366 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 PKMP14618 531 aaKnown RBP12.15□□□□□ -0.46
VPS33B-201ENST00000333371 DCKP27707 260 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 EEFSECP57772 596 aaKnown RBP12.15□□□□□ -0.46
VPS33B-201ENST00000333371 PTGR1Q14914 329 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 TGFBIQ15582 683 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 IMPG1Q17R60 797 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 ZFAND4Q86XD8 727 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 RIMKLAQ8IXN7 391 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 CLEC4FQ8N1N0 589 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 PAPD5Q8NDF8 572 aaKnown RBP12.15□□□□□ -0.46
VPS33B-201ENST00000333371 OR56A4Q8NGH8 313 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 OR10Q1Q8NGQ4 319 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 METTL6Q8TCB7 284 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 BPIFB1Q8TDL5 484 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 FIG4Q92562 907 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 C8orf48Q96LL4 319 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 TSEN34Q9BSV6 310 aaKnown RBP12.15□□□□□ -0.46
VPS33B-201ENST00000333371 CINPQ9BW66 212 aaPredicted RBP12.15□□□□□ -0.46
VPS33B-201ENST00000333371 LRRC3Q9BY71 257 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 CD320Q9NPF0 282 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 DOLKQ9UPQ8 538 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 NEUROG3Q9Y4Z2 214 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 FAM234BA2RU67 622 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 SYCE1LA8MT33 242 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 TLR5O60602 858 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms