RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 GALPQ9UBC7 116 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 ZNF112Q9UJU3 913 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 NRCAMQ92823 1304 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 J3KR12 359 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 CDC7O00311 574 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 MITFO75030 526 aaPredicted RBP7.8□□□□□ -1.16
VMA21-201ENST00000330374 FADS2O95864 444 aaKnown RBP7.8□□□□□ -1.16
VMA21-201ENST00000330374 GP2P55259 537 aaKnown RBP7.8□□□□□ -1.16
VMA21-201ENST00000330374 RPS3AP61247 264 aaKnown RBP7.8□□□□□ -1.16
VMA21-201ENST00000330374 GALNT3Q14435 633 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 TAF1CQ15572 869 aaPredicted RBP7.8□□□□□ -1.16
VMA21-201ENST00000330374 ANKRD13BQ86YJ7 626 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 FAM126BQ8IXS8 530 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 SCML4Q8N228 414 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 OR13C4Q8NGS5 318 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 USP7Q93009 1102 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 FCRL2Q96LA5 508 aaPredicted RBP7.8□□□□□ -1.16
VMA21-201ENST00000330374 TMUB1Q9BVT8 246 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 IGFLR1Q9H665 355 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 GPN2Q9H9Y4 310 aaPredicted RBP7.8□□□□□ -1.16
VMA21-201ENST00000330374 PALMDQ9NP74 551 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 ERVK-18Q9QC07 812 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.8□□□□□ -1.16
VMA21-201ENST00000330374 LEF1Q9UJU2 399 aaPredicted RBP7.8□□□□□ -1.16
VMA21-201ENST00000330374 GPR45Q9Y5Y3 372 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 ASB14A6NK59 587 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 PFDN6O15212 129 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 SOAT2O75908 522 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 RHOBTB1O94844 696 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 SEC24AO95486 1093 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 S1PR4O95977 384 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 LEPRP48357 1165 aaKnown RBP7.8□□□□□ -1.16
VMA21-201ENST00000330374 TWF2Q6IBS0 349 aaKnown RBP7.8□□□□□ -1.16
VMA21-201ENST00000330374 TXNDC11Q6PKC3 985 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 RANBP10Q6VN20 620 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 CCDC80Q76M96 950 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 ZNF438Q7Z4V0 828 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 MILR1Q7Z6M3 343 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 PHYKPLQ8IUZ5 450 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 OR10A6Q8NH74 314 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 PNPT1Q8TCS8 783 aaKnown RBP7.8□□□□□ -1.16
VMA21-201ENST00000330374 SLC9A7Q96T83 725 aa7.8□□□□□ -1.16
VMA21-201ENST00000330374 PAK1IP1Q9NWT1 392 aaPredicted RBP7.8□□□□□ -1.16
VMA21-201ENST00000330374 NPEPPSL1A6NEC2 478 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 MATN3O15232 486 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 TBX1O43435 398 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 OR4F21O95013 312 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 SLC2A3P11169 496 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 CCNCP24863 283 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 GSTM2P28161 218 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 RPL34P49207 117 aaKnown RBP7.79□□□□□ -1.16
VMA21-201ENST00000330374 ATP4BP51164 291 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 ADAM17P78536 824 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 SLC10A7Q0GE19 358 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 ADPRMQ3LIE5 342 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 CATSPEREQ5SY80 951 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 SULT1C3Q6IMI6 304 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 ZNF549Q6P9A3 640 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 PAQR3Q6TCH7 311 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 C14orf80Q86SX3 495 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 COLGALT2Q8IYK4 626 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 OR2T11Q8NH01 316 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 MCOLN3Q8TDD5 553 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 TMEM40Q8WWA1 233 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 DNAJB3Q8WWF6 145 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 RORBQ92753 470 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 FAM162AQ96A26 154 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 MAGED4Q96JG8 741 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 B3GALT6Q96L58 329 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 SENP8Q96LD8 212 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 RIBC2Q9H4K1 309 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 ZNF408Q9H9D4 720 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 POLR3BQ9NW08 1133 aaPredicted RBP7.79□□□□□ -1.16
VMA21-201ENST00000330374 GMIPQ9P107 970 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 UXTQ9UBK9 157 aaPredicted RBP7.79□□□□□ -1.16
VMA21-201ENST00000330374 TANC1Q9C0D5 1861 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 MYLKQ15746 1914 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 PARP14Q460N5 1801 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 MIA3Q5JRA6 1907 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 BTN3A1O00481 513 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 GOT2P00505 430 aaKnown RBP7.79□□□□□ -1.16
VMA21-201ENST00000330374 ADRA1AP35348 466 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 PGFP49763 221 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 PHKG1Q16816 387 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 SGO1Q5FBB7 561 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 MARCH8Q5T0T0 291 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 PDPRQ8NCN5 879 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 CYP2S1Q96SQ9 504 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 HGH1Q9BTY7 390 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 C6orf62Q9GZU0 229 aaPredicted RBP7.79□□□□□ -1.16
VMA21-201ENST00000330374 ADGRE2Q9UHX3 823 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 IKZF3Q9UKT9 509 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 CASTOR2A6NHX0 329 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 H0YAE9 185 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 DFNA5O60443 496 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 CHEK2O96017 543 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 ANXA6P08133 673 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 CDH1P12830 882 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 MTHFD2P13995 350 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 POLD2P49005 469 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms