RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 CBSLP0DN79 551 aa14.72□□□□□ -0.05
TPM3-205ENST00000328159 CCND1P24385 295 aa14.72□□□□□ -0.05
TPM3-205ENST00000328159 CBSP35520 551 aa14.72□□□□□ -0.05
TPM3-205ENST00000328159 MMP12P39900 470 aa14.72□□□□□ -0.05
TPM3-205ENST00000328159 FOXA1P55317 472 aa14.72□□□□□ -0.05
TPM3-205ENST00000328159 RBBP7Q16576 425 aa14.72□□□□□ -0.05
TPM3-205ENST00000328159 PPP1R3AQ16821 1122 aa14.72□□□□□ -0.05
TPM3-205ENST00000328159 SNX32Q86XE0 403 aa14.72□□□□□ -0.05
TPM3-205ENST00000328159 SCUBE1Q8IWY4 988 aa14.72□□□□□ -0.05
TPM3-205ENST00000328159 TRAM1L1Q8N609 369 aa14.72□□□□□ -0.05
TPM3-205ENST00000328159 TERB1Q8NA31 727 aa14.72□□□□□ -0.05
TPM3-205ENST00000328159 OR56A4Q8NGH8 313 aa14.72□□□□□ -0.05
TPM3-205ENST00000328159 RP9Q8TA86 221 aaKnown RBP14.72□□□□□ -0.05
TPM3-205ENST00000328159 TWIST2Q8WVJ9 160 aa14.72□□□□□ -0.05
TPM3-205ENST00000328159 OR8D1Q8WZ84 308 aa14.72□□□□□ -0.05
TPM3-205ENST00000328159 ESAMQ96AP7 390 aa14.72□□□□□ -0.05
TPM3-205ENST00000328159 FAM161BQ96MY7 647 aa14.72□□□□□ -0.05
TPM3-205ENST00000328159 KCNA7Q96RP8 456 aa14.72□□□□□ -0.05
TPM3-205ENST00000328159 RIOK2Q9BVS4 552 aaKnown RBP14.72□□□□□ -0.05
TPM3-205ENST00000328159 ADAMTS6Q9UKP5 1117 aa14.72□□□□□ -0.05
TPM3-205ENST00000328159 SARDHQ9UL12 918 aa14.72□□□□□ -0.05
TPM3-205ENST00000328159 OARD1Q9Y530 152 aa14.72□□□□□ -0.05
TPM3-205ENST00000328159 A0A1B0GTL3 188 aa14.71□□□□□ -0.05
TPM3-205ENST00000328159 E2F3O00716 465 aa14.71□□□□□ -0.05
TPM3-205ENST00000328159 FFAR2O15552 330 aa14.71□□□□□ -0.05
TPM3-205ENST00000328159 GPC4O75487 556 aa14.71□□□□□ -0.05
TPM3-205ENST00000328159 CD1EP15812 388 aa14.71□□□□□ -0.05
TPM3-205ENST00000328159 GM2AP17900 193 aa14.71□□□□□ -0.05
TPM3-205ENST00000328159 ITGAXP20702 1163 aa14.71□□□□□ -0.05
TPM3-205ENST00000328159 AKT1P31749 480 aa14.71□□□□□ -0.05
TPM3-205ENST00000328159 OPRD1P41143 372 aa14.71□□□□□ -0.05
TPM3-205ENST00000328159 FCHO2Q0JRZ9 810 aa14.71□□□□□ -0.05
TPM3-205ENST00000328159 CYLC2Q14093 348 aaPredicted RBP14.71□□□□□ -0.05
TPM3-205ENST00000328159 ZNF234Q14588 700 aa14.71□□□□□ -0.05
TPM3-205ENST00000328159 PCBP2Q15366 365 aaKnown RBP eCLIP14.71□□□□□ -0.056e-13■■■□□ 18
TPM3-205ENST00000328159 C9orf64Q5T6V5 341 aa14.71□□□□□ -0.05
TPM3-205ENST00000328159 NAIF1Q69YI7 327 aaPredicted RBP14.71□□□□□ -0.05
TPM3-205ENST00000328159 LARP4Q71RC2 724 aaKnown RBP eCLIP14.71□□□□□ -0.051e-8■□□□□ 9.3
TPM3-205ENST00000328159 TECPR1Q7Z6L1 1165 aa14.71□□□□□ -0.05
TPM3-205ENST00000328159 SFTPA1Q8IWL2 248 aa14.71□□□□□ -0.05
TPM3-205ENST00000328159 YAF2Q8IY57 180 aa14.71□□□□□ -0.05
TPM3-205ENST00000328159 ULK2Q8IYT8 1036 aa14.71□□□□□ -0.05
TPM3-205ENST00000328159 PDPRQ8NCN5 879 aa14.71□□□□□ -0.05
TPM3-205ENST00000328159 TMIEQ8NEW7 156 aa14.71□□□□□ -0.05
TPM3-205ENST00000328159 DCUN1D1Q96GG9 259 aa14.71□□□□□ -0.05
TPM3-205ENST00000328159 C3orf30Q96M34 536 aa14.71□□□□□ -0.05
TPM3-205ENST00000328159 PLA2G2FQ9BZM2 168 aa14.71□□□□□ -0.05
TPM3-205ENST00000328159 NSUN3Q9H649 340 aaKnown RBP14.71□□□□□ -0.05
TPM3-205ENST00000328159 MRGBPQ9NV56 204 aa14.71□□□□□ -0.05
TPM3-205ENST00000328159 ASB1Q9Y576 335 aa14.71□□□□□ -0.05
TPM3-205ENST00000328159 TNPO3Q9Y5L0 923 aaKnown RBP14.71□□□□□ -0.05
TPM3-205ENST00000328159 TRANK1O15050 2925 aa14.71□□□□□ -0.06
TPM3-205ENST00000328159 PIP5K1BO14986 540 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 PEX11AO75192 247 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 CRCPO75575 148 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 ESRRBO95718 433 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 ATP1B2P14415 290 aaPredicted RBP14.7□□□□□ -0.06
TPM3-205ENST00000328159 CCR7P32248 378 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 RUNX3Q13761 415 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 GRM2Q14416 872 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 SQLEQ14534 574 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 HENMT1Q5T8I9 393 aaKnown RBP14.7□□□□□ -0.06
TPM3-205ENST00000328159 LIPIQ6XZB0 460 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 DET1Q7L5Y6 550 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 SYVN1Q86TM6 617 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 PIP4K2CQ8TBX8 421 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 ARRDC3Q96B67 414 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 CLPTM1LQ96KA5 538 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 MYADMQ96S97 322 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 ZSCAN5AQ9BUG6 496 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 NUSAP1Q9BXS6 441 aaKnown RBP14.7□□□□□ -0.06
TPM3-205ENST00000328159 A0A088AWK7 358 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 ATP6AP2A0A1C7CYW4 349 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 CFAP99D6REC4 459 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 EIF3FO00303 357 aaPredicted RBP14.7□□□□□ -0.06
TPM3-205ENST00000328159 CHUKO15111 745 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 ENTPD5O75356 428 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 ATP6AP2O75787 350 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 CIB2O75838 187 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 ELFN1P0C7U0 828 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 ENO3P13929 434 aaPredicted RBP14.7□□□□□ -0.06
TPM3-205ENST00000328159 ITGB7P26010 798 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 AOAHP28039 575 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 CDC16Q13042 620 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 GRIN2CQ14957 1233 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 KPNB1Q14974 876 aaKnown RBP14.7□□□□□ -0.06
TPM3-205ENST00000328159 ACOX1Q15067 660 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 PHKG1Q16816 387 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 ZNF284Q2VY69 593 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 C18orf21Q32NC0 220 aaPredicted RBP14.7□□□□□ -0.06
TPM3-205ENST00000328159 GPRIN3Q6ZVF9 776 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 EFL1Q7Z2Z2 1120 aaKnown RBP14.7□□□□□ -0.06
TPM3-205ENST00000328159 DDIASQ8IXT1 998 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 UCMAQ8WVF2 138 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 TIFAQ96CG3 184 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 ZNF382Q96SR6 550 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 GDF15Q99988 308 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 TMEM245Q9H330 911 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 TUBB1Q9H4B7 451 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 CD248Q9HCU0 757 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms