RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 CD84Q9UIB8 345 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 TMPRSS11EQ9UL52 423 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 FZD4Q9ULV1 537 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 CA14Q9ULX7 337 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 WDR37Q9Y2I8 494 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 MED16Q9Y2X0 877 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 ACOT9Q9Y305 439 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 EYSQ5T1H1 3165 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 KANSL1LA0AUZ9 987 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 UBA6A0AVT1 1052 aaPredicted RBP12.6□□□□□ -0.39
DDX39A-202ENST00000324340 NEMP1O14524 444 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 PRMT5O14744 637 aaPredicted RBP12.6□□□□□ -0.39
DDX39A-202ENST00000324340 PHGDHO43175 533 aaKnown RBP12.6□□□□□ -0.39
DDX39A-202ENST00000324340 OR1I1O60431 355 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 MMP20O60882 483 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 RNASEH2AO75792 299 aaKnown RBP12.6□□□□□ -0.39
DDX39A-202ENST00000324340 RECQL5O94762 991 aaPredicted RBP12.6□□□□□ -0.39
DDX39A-202ENST00000324340 PKMP14618 531 aaKnown RBP12.6□□□□□ -0.39
DDX39A-202ENST00000324340 TARSP26639 723 aaKnown RBP12.6□□□□□ -0.39
DDX39A-202ENST00000324340 FMO4P31512 558 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 RAP1GDS1P52306 607 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 SLC12A2P55011 1212 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 ADRM1Q16186 407 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 ZNF284Q2VY69 593 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 TAF1BQ53T94 588 aaPredicted RBP12.6□□□□□ -0.39
DDX39A-202ENST00000324340 KYAT3Q6YP21 454 aaKnown RBP12.6□□□□□ -0.39
DDX39A-202ENST00000324340 SYT13Q7L8C5 426 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 KBTBD6Q86V97 674 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 ANKRD42Q8N9B4 389 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 CXorf40AQ8TE69 158 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 C10orf82Q8WW14 230 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 KCNJ9Q92806 393 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 STMN2Q93045 179 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 AP2M1Q96CW1 435 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 SIPA1Q96FS4 1042 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 HIC2Q96JB3 615 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 UBXN10Q96LJ8 280 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 RIOK2Q9BVS4 552 aaKnown RBP12.6□□□□□ -0.39
DDX39A-202ENST00000324340 VPS11Q9H270 941 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 GPAMQ9HCL2 828 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 LTB4R2Q9NPC1 389 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 FBXL12Q9NXK8 326 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 GALNT8Q9NY28 637 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 SLC17A7Q9P2U7 560 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 TLK1Q9UKI8 766 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 GRID1Q9ULK0 1009 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 BPTFQ12830 3046 aa12.6□□□□□ -0.39
DDX39A-202ENST00000324340 F5P12259 2224 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 FADS2P1A8MWK0 482 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 H3BMM5 538 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 BIRC5O15392 142 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 MAGEC1O60732 1142 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 SOD1P00441 154 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 TROVE2P10155 538 aaKnown RBP eCLIP12.59□□□□□ -0.39
DDX39A-202ENST00000324340 GABRG2P18507 467 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 NDUFV2P19404 249 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 SAT1P21673 171 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 NSG1P42857 185 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 IRF9Q00978 393 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 SETMARQ53H47 684 aaPredicted RBP12.59□□□□□ -0.39
DDX39A-202ENST00000324340 C1QTNF12Q5T7M4 302 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 NEK5Q6P3R8 708 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 LVRNQ6Q4G3 990 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 MACC1Q6ZN28 852 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 Q6ZS52 159 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 RAPH1Q70E73 1250 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 CACUL1Q86Y37 369 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 CENPLQ8N0S6 344 aaPredicted RBP12.59□□□□□ -0.39
DDX39A-202ENST00000324340 PLD6Q8N2A8 252 aaKnown RBP12.59□□□□□ -0.39
DDX39A-202ENST00000324340 DDHD1Q8NEL9 900 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 BTN2A2Q8WVV5 523 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 NUS1Q96E22 293 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 CATSPER2Q96P56 530 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 COPS8Q99627 209 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 BOCQ9BWV1 1114 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 CLPBQ9H078 707 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 IQCGQ9H095 443 aaKnown RBP12.59□□□□□ -0.39
DDX39A-202ENST00000324340 SLC6A17Q9H1V8 727 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 CCDC68Q9H2F9 335 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 LMAN1LQ9HAT1 526 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 TBCCD1Q9NVR7 557 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 TAS2R13Q9NYV9 303 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 PTTG2Q9NZH5 202 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 GNPTGQ9UJJ9 305 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 HAO1Q9UJM8 370 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 EMCNQ9ULC0 261 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 MTF2Q9Y483 593 aaPredicted RBP12.59□□□□□ -0.39
DDX39A-202ENST00000324340 OAS3Q9Y6K5 1087 aaKnown RBP12.59□□□□□ -0.39
DDX39A-202ENST00000324340 SPTBN5Q9NRC6 3674 aaKnown RBP12.59□□□□□ -0.39
DDX39A-202ENST00000324340 ATG2BQ96BY7 2078 aa12.59□□□□□ -0.39
DDX39A-202ENST00000324340 MAP3K13O43283 966 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 LZTS3O60299 673 aaPredicted RBP12.58□□□□□ -0.4
DDX39A-202ENST00000324340 ATG13O75143 517 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 VPS26AO75436 327 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 TM7SF2O76062 418 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 KLHL2O95198 593 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 TGDSO95455 350 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 TOP3BO95985 862 aaKnown RBP12.58□□□□□ -0.4
DDX39A-202ENST00000324340 IGLV3-19P01714 112 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 DGKEP52429 567 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms