RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 PPCDCQ96CD2 204 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 C2orf49Q9BVC5 232 aaPredicted RBP7.83□□□□□ -1.16
CIITA-201ENST00000324288 ZNF471Q9BX82 626 aaPredicted RBP7.83□□□□□ -1.16
CIITA-201ENST00000324288 RTFDC1Q9BY42 306 aaPredicted RBP7.83□□□□□ -1.16
CIITA-201ENST00000324288 EIF2B4Q9UI10 523 aaKnown RBP7.83□□□□□ -1.16
CIITA-201ENST00000324288 TESMINQ9Y4I5 508 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 IQGAP3Q86VI3 1631 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 IRGMA1A4Y4 181 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 TVP23AA6NH52 213 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 TULP2O00295 520 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 ABLIM1O14639 778 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 AXIN1O15169 862 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 TNFSF9P41273 254 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 TTPAP49638 278 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 DGLUCYQ7Z3D6 616 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 AZIN2Q96A70 460 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 CERS2Q96G23 380 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 C5orf34Q96MH7 638 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 TSSK3Q96PN8 268 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 GAL3ST4Q96RP7 486 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 ANKRA2Q9H9E1 313 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 SNX15Q9NRS6 342 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 PLK2Q9NYY3 685 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 TRPV2Q9Y5S1 764 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 H3BNX3 289 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 SLC35G4P0C7Q5 338 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 CLCN5P51795 746 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 GARNL3Q5VVW2 1013 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 CEP68Q76N32 757 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 TMPRSS11BQ86T26 416 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 TRABD2AQ86V40 505 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 LIX1Q8N485 282 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 ZDHHC15Q96MV8 337 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 PTPN18Q99952 460 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 ZNF69Q9UC07 566 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 WDR37Q9Y2I8 494 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 TRAF6Q9Y4K3 522 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 SQORQ9Y6N5 450 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 SCGB1D2O95969 90 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 ADRB2P07550 413 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 ARCQ7LC44 396 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 HDAC10Q969S8 669 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 CDCA5Q96FF9 252 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 AP1S3Q96PC3 154 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 WNK2Q9Y3S1 2297 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 ASTN2O75129 1339 aaPredicted RBP7.83□□□□□ -1.16
CIITA-201ENST00000324288 TCRBV7S2A1N4TA0A589 114 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 PAEPP09466 180 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 ELFN1P0C7U0 828 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 PRKCHP24723 683 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 RARRES1P49788 294 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 ZBTB6Q15916 424 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 PCID2Q5JVF3 399 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 CLNKQ7Z7G1 428 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 EXOSC8Q96B26 276 aaKnown RBP7.83□□□□□ -1.16
CIITA-201ENST00000324288 CD84Q9UIB8 345 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 ABCA8O94911 1581 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 TDRD6O60522 2096 aaKnown RBP7.83□□□□□ -1.16
CIITA-201ENST00000324288 ZNF208O43345 1280 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 MC4RP32245 332 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 GABRB2P47870 512 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 SLC9A3P48764 834 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 FAM76BQ5HYJ3 339 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 UBAP2Q5T6F2 1119 aaKnown RBP7.83□□□□□ -1.16
CIITA-201ENST00000324288 PLPP4Q5VZY2 271 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 DUPD1Q68J44 220 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 CRELD1Q96HD1 420 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 LMLNQ96KR4 655 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 UXTQ9UBK9 157 aaPredicted RBP7.83□□□□□ -1.16
CIITA-201ENST00000324288 PDLIM1O00151 329 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 CCL22O00626 93 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 CXCR2P25025 360 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 TMEM119Q4V9L6 283 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 CLEC6AQ6EIG7 209 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 WNT8BQ93098 351 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 ADARB2Q9NS39 739 aaKnown RBP7.83□□□□□ -1.16
CIITA-201ENST00000324288 MARK1Q9P0L2 795 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 SLC17A6Q9P2U8 582 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 MSRAQ9UJ68 235 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 ASF1AQ9Y294 204 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 SPIN1Q9Y657 262 aaPredicted RBP7.83□□□□□ -1.16
CIITA-201ENST00000324288 HMGB3O15347 200 aaKnown RBP7.83□□□□□ -1.16
CIITA-201ENST00000324288 MTHFD1P11586 935 aaKnown RBP7.83□□□□□ -1.16
CIITA-201ENST00000324288 RPS3P23396 243 aaKnown RBP eCLIP7.83□□□□□ -1.16
CIITA-201ENST00000324288 SSR2P43308 183 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 ATXN7L3Q14CW9 347 aaPredicted RBP7.83□□□□□ -1.16
CIITA-201ENST00000324288 LAPTM4BQ86VI4 370 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 ZNF607Q96SK3 696 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 MED11Q9P086 117 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 RIIAD1A6NNX1 92 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 CREB1P16220 341 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 PPM1AP35813 382 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 SF1Q15637 639 aaKnown RBP7.83□□□□□ -1.16
CIITA-201ENST00000324288 USP41Q3LFD5 358 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 PAOXQ6QHF9 649 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 ADGRG6Q86SQ4 1221 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 SLITRK4Q8IW52 837 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 KCT2Q8NC54 265 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 ZMIZ2Q8NF64 920 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 ZCCHC10Q8TBK6 192 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms