RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 DDX43Q9NXZ2 648 aaKnown RBP9.64□□□□□ -0.87
COL12A1-201ENST00000322507 MAN2B2Q9Y2E5 1009 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 RAP2CQ9Y3L5 183 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 OR6C6A6NF89 314 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 TO15178 435 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 AIREO43918 545 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 ZNF35P13682 527 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 RFX5P48382 616 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-201ENST00000322507 ALDH9A1P49189 494 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 CDK9P50750 372 aaKnown RBP9.64□□□□□ -0.87
COL12A1-201ENST00000322507 COLEC12Q5KU26 742 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 COMMD1Q8N668 190 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 WDR48Q8TAF3 677 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 RERGQ96A58 199 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-201ENST00000322507 OSGEPL1Q9H4B0 414 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 GMPPBQ9Y5P6 360 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 SLIT3O75094 1523 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 AKR1A1P14550 325 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 ADRA1DP25100 572 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 ACSL1P33121 698 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 AFF3P51826 1226 aaKnown RBP9.64□□□□□ -0.87
COL12A1-201ENST00000322507 SEC14L1Q92503 715 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 PORCNQ9H237 461 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 SEMA3GQ9NS98 782 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 UBR1Q8IWV7 1749 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 INHBEP58166 350 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 DPYSL3Q14195 570 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 KCNT2Q6UVM3 1135 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 RHOUQ7L0Q8 258 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 SYT12Q8IV01 421 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 FAM163AQ96GL9 167 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-201ENST00000322507 RTKNQ9BST9 563 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 CDHR5Q9HBB8 845 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 FAM205CA6NFA0 338 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 MICAL2O94851 1124 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 VARSP26640 1264 aaKnown RBP9.64□□□□□ -0.87
COL12A1-201ENST00000322507 HTR1BP28222 390 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 UBXN2BQ14CS0 331 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 SEC23AQ15436 765 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 OTUD3Q5T2D3 398 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-201ENST00000322507 ZNF621Q6ZSS3 439 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 COX15Q7KZN9 410 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 TMC8Q8IU68 726 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 CDYL2Q8N8U2 506 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 BTBD9Q96Q07 612 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 TLR10Q9BXR5 811 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 MON2Q7Z3U7 1717 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 HDAC3O15379 428 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 RBMXL2O75526 392 aaKnown RBP9.64□□□□□ -0.87
COL12A1-201ENST00000322507 SLC25A12O75746 678 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 KELP23276 732 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 SLC12A3P55017 1021 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 NAA30Q147X3 362 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-201ENST00000322507 HMGN3Q15651 99 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 PTAR1Q7Z6K3 402 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-201ENST00000322507 OR2AP1Q8NGE2 309 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 SEPHS2Q99611 448 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 TTLL2Q9BWV7 592 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 OSGEPQ9NPF4 335 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 RIC1Q4ADV7 1423 aa9.64□□□□□ -0.87
COL12A1-201ENST00000322507 FAM237AA0A1B0GTK4 181 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 CERS1P27544 350 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 IQSEC1Q6DN90 963 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 CREG2Q8IUH2 290 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 ALLCQ8N6M5 410 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 BHLHE22Q8NFJ8 381 aaPredicted RBP9.63□□□□□ -0.87
COL12A1-201ENST00000322507 KAT5Q92993 513 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 ACSS3Q9H6R3 686 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 DNMT3LQ9UJW3 386 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 DCXO43602 365 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 RAB10P61026 200 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 FAM71AQ8IYT1 594 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 ARL6IP6Q8N6S5 226 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 MFSD8Q8NHS3 518 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 ARHGAP20Q9P2F6 1191 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 ZNF175Q9Y473 711 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 CYP1A2P05177 515 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 ITGB1P05556 798 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 CHMP24386 653 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 RARRES1P49788 294 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 NDST1P52848 882 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 ZMAT1Q5H9K5 638 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 OR2L2Q8NH16 312 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 TRIM43Q96BQ3 446 aaPredicted RBP9.63□□□□□ -0.87
COL12A1-201ENST00000322507 SLC29A1Q99808 456 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 SEMA4AQ9H3S1 761 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 TOR3AQ9H497 397 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 MDFIC2A0A1B0GVS7 189 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 ZNF705EA8MWA4 302 aaPredicted RBP9.63□□□□□ -0.87
COL12A1-201ENST00000322507 C9P02748 559 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 ZNF37AP17032 561 aaPredicted RBP9.63□□□□□ -0.87
COL12A1-201ENST00000322507 TBX2Q13207 712 aaPredicted RBP9.63□□□□□ -0.87
COL12A1-201ENST00000322507 CBWD6Q4V339 395 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 STXBP5Q5T5C0 1151 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 USP49Q70CQ1 688 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 KIAA0895Q8NCT3 520 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 HEPHQ9BQS7 1158 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 PACSIN3Q9UKS6 424 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 PCDHGB7Q9Y5F8 929 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 MYPNQ86TC9 1320 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms