RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 TSHRP16473 764 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 MAPK10P53779 464 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 TRMT5Q32P41 509 aaKnown RBP13.34□□□□□ -0.27
RFFL-201ENST00000315249 CRYBG2Q8N1P7 616 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 OR4E2Q8NGC2 313 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 SEC14L3Q9UDX4 400 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 PCDHB3Q9Y5E6 796 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 UPK3BL1B0FP48 263 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 TMEM150CB9EJG8 249 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 UPK3BL2E5RIL1 263 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 CYBAP13498 195 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 VIPR1P32241 457 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 AENQ8WTP8 325 aaKnown RBP13.34□□□□□ -0.27
RFFL-201ENST00000315249 HDHD2Q9H0R4 259 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 ADAM7Q9H2U9 754 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 MCCC2Q9HCC0 563 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 ANKRD12Q6UB98 2062 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 A0A0J9YVX5 310 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 GPR32O75388 356 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 IPO13O94829 963 aaKnown RBP13.34□□□□□ -0.27
RFFL-201ENST00000315249 GJB5O95377 273 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 ADH1BP00325 375 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 RYKP34925 604 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 ATP12AP54707 1039 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 DEFA1P59665 94 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 DEFA3P59666 94 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 HYAL2Q12891 473 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 NR1D2Q14995 579 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 KLHL25Q9H0H3 589 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 NOD2Q9HC29 1040 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 KCNK6Q9Y257 313 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 PI15O43692 258 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 CCNA2P20248 432 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 SPIRE1Q08AE8 756 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 FAM98AQ8NCA5 519 aaKnown RBP13.34□□□□□ -0.27
RFFL-201ENST00000315249 ZNF514Q96K75 400 aaPredicted RBP13.34□□□□□ -0.27
RFFL-201ENST00000315249 SLC38A2Q96QD8 506 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 PAAF1Q9BRP4 392 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 ZSCAN5AQ9BUG6 496 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 NUSAP1Q9BXS6 441 aaKnown RBP13.34□□□□□ -0.27
RFFL-201ENST00000315249 CEP44Q9C0F1 390 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 ANKHQ9HCJ1 492 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 GALNT8Q9NY28 637 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 CCDC162PA2VCL2 907 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 PITPNM1O00562 1244 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 ALOX15BO15296 676 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 HDAC3O15379 428 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 PAK4O96013 591 aaPredicted RBP13.34□□□□□ -0.27
RFFL-201ENST00000315249 HNRNPH3P31942 346 aaKnown RBP13.34□□□□□ -0.27
RFFL-201ENST00000315249 GABRB2P47870 512 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 FASTKD3Q14CZ7 662 aaKnown RBP13.34□□□□□ -0.27
RFFL-201ENST00000315249 FAM182AQ5T1J6 154 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 ESAMQ96AP7 390 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 C19orf60Q96EN9 201 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 PNPOQ9NVS9 261 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 UBXN7O94888 489 aa13.33□□□□□ -0.27
RFFL-201ENST00000315249 CPN2P22792 545 aa13.33□□□□□ -0.27
RFFL-201ENST00000315249 INAQ16352 499 aa13.33□□□□□ -0.27
RFFL-201ENST00000315249 CLEC6AQ6EIG7 209 aa13.33□□□□□ -0.27
RFFL-201ENST00000315249 UXS1Q8NBZ7 420 aa13.33□□□□□ -0.27
RFFL-201ENST00000315249 SLC22A18Q96BI1 424 aa13.33□□□□□ -0.27
RFFL-201ENST00000315249 DLGAP2Q9P1A6 1054 aa13.33□□□□□ -0.27
RFFL-201ENST00000315249 A0A1W2PP55 124 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 ABHD2P08910 425 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 POU5F1Q01860 360 aaKnown RBP13.33□□□□□ -0.28
RFFL-201ENST00000315249 ZMIZ2Q8NF64 920 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 SMOC2Q9H3U7 446 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 EGFL7Q9UHF1 273 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 NOCTQ9UK39 431 aaKnown RBP13.33□□□□□ -0.28
RFFL-201ENST00000315249 A8MUI8 341 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 FKBP6O75344 327 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 IL6P05231 212 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 EFNA1P20827 205 aaPredicted RBP13.33□□□□□ -0.28
RFFL-201ENST00000315249 TM4SF4P48230 202 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 DRG2P55039 364 aaKnown RBP13.33□□□□□ -0.28
RFFL-201ENST00000315249 PON2Q15165 354 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 MS4A13Q5J8X5 152 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 DCLRE1BQ9H816 532 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 NBNO60934 754 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 ITGA2P17301 1181 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 UGT2B15P54855 530 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 OASLQ15646 514 aaKnown RBP13.33□□□□□ -0.28
RFFL-201ENST00000315249 NRF1Q16656 503 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 MORN1Q5T089 497 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 SLC39A4Q6P5W5 647 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 OR8H2Q8N162 312 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 PRICKLE1Q96MT3 831 aaPredicted RBP13.33□□□□□ -0.28
RFFL-201ENST00000315249 ZMAT2Q96NC0 199 aaKnown RBP13.33□□□□□ -0.28
RFFL-201ENST00000315249 SMOQ99835 787 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 SAGP10523 405 aaPredicted RBP13.33□□□□□ -0.28
RFFL-201ENST00000315249 VIPR2P41587 438 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 SIRPB2Q5JXA9 342 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 SULT1C3Q6IMI6 304 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 IZUMO1Q8IYV9 350 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 CPT1BQ92523 772 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 NECTIN4Q96NY8 510 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 MTERF1Q99551 399 aaKnown RBP13.33□□□□□ -0.28
RFFL-201ENST00000315249 MCOLN1Q9GZU1 580 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 SPHK2Q9NRA0 654 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 EIF2B4Q9UI10 523 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms