RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 EXOSC8Q96B26 276 aaKnown RBP11.84□□□□□ -0.51
AMBRA1-201ENST00000314845 RBM18Q96H35 190 aaKnown RBP11.84□□□□□ -0.51
AMBRA1-201ENST00000314845 C5orf34Q96MH7 638 aa11.84□□□□□ -0.51
AMBRA1-201ENST00000314845 SUV39H2Q9H5I1 410 aa11.84□□□□□ -0.51
AMBRA1-201ENST00000314845 ASNA1O43681 348 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 OR1F1O43749 312 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 NPHS1O60500 1241 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 NBNO60934 754 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 ALPPL2P10696 532 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 ALAS2P22557 587 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 VARSP26640 1264 aaKnown RBP11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 AQP1P29972 269 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 PTGIRP43119 386 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 ATXN1P54253 815 aaKnown RBP11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 ECT2LQ008S8 904 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 CYP1B1Q16678 543 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 SYPL2Q5VXT5 272 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 B3GNT6Q6ZMB0 384 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 PTCHD4Q6ZW05 846 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 AMZ2Q86W34 360 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 HID1Q8IV36 788 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 FSTL5Q8N475 847 aaPredicted RBP11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 SLC9A6Q92581 669 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 EMID1Q96A84 441 aaPredicted RBP11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 ZNF354BQ96LW1 612 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 SLC38A3Q99624 504 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 G3V2T6 193 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 CSKP41240 450 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 RGS8P57771 180 aaPredicted RBP11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 PRR5P85299 388 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 TCEAL5Q5H9L2 206 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 ARMC3Q5W041 872 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 PGAM4Q8N0Y7 254 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 ADCY4Q8NFM4 1077 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 RNF39Q9H2S5 420 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 TXNRD2Q9NNW7 524 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 RUVBL1Q9Y265 456 aaKnown RBP11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 WNT9AO14904 365 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 SIN3BO75182 1162 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 RINLQ6ZS11 566 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 BEND5Q7L4P6 421 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 DCBLD1Q8N8Z6 715 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 ZHX1-C8orf76Q96EF9 292 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 PRRG4Q9BZD6 226 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 MINDY3Q9H8M7 445 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 GDAP2Q9NXN4 497 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 OGDHLQ9ULD0 1010 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 MRPS7Q9Y2R9 242 aaKnown RBP11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 AP4B1Q9Y6B7 739 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 OR4F21O95013 312 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 HSD17B2P37059 387 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 SEC13P55735 322 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 OLR1P78380 273 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 ZNF155Q12901 538 aaPredicted RBP11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 TRIM32Q13049 653 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 DPYSQ14117 519 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 ZBTB6Q15916 424 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 CLEC6AQ6EIG7 209 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 FBXL22Q6P050 247 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 HDDC3Q8N4P3 179 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 FAM98AQ8NCA5 519 aaKnown RBP11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 OR2T34Q8NGX1 318 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 OR2T3Q8NH03 318 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 NPLOC4Q8TAT6 608 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 SLC35B2Q8TB61 432 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 DNASE1L2Q92874 299 aa11.83□□□□□ -0.52
AMBRA1-201ENST00000314845 GSC2O15499 205 aa11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 IFNW1P05000 195 aa11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 MAT2AP31153 395 aaKnown RBP11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 MYBPC1Q00872 1141 aa11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 FSTL1Q12841 308 aa11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 PTGES3Q15185 160 aaKnown RBP11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 KLHL17Q6TDP4 642 aa11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 GLB1L3Q8NCI6 653 aaPredicted RBP11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 C8orf48Q96LL4 319 aa11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 MIPEPQ99797 713 aa11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 GINS4Q9BRT9 223 aa11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 SRMSQ9H3Y6 488 aa11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 POLR3BQ9NW08 1133 aaPredicted RBP11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 C1orf109Q9NX04 203 aa11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 EIF2B4Q9UI10 523 aaKnown RBP11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 M0R2N6 131 aa11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 SNPHO15079 494 aa11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 MATN4O95460 622 aa11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 TBX18O95935 607 aa11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 CTSKP43235 329 aa11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 PLEKHG4Q58EX7 1191 aa11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 CDCA2Q69YH5 1023 aaPredicted RBP11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 ZNF730Q6ZMV8 503 aa11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 CNPPD1Q9BV87 410 aa11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 UNC93B1Q9H1C4 597 aa11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 CLK4Q9HAZ1 481 aaKnown RBP11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 ELL3Q9HB65 397 aaPredicted RBP11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 SSR3Q9UNL2 185 aa11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 SH3GLB1Q9Y371 365 aa11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 SEC24AO95486 1093 aa11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 RABGGTBP53611 331 aa11.82□□□□□ -0.52
AMBRA1-201ENST00000314845 DCTN2Q13561 401 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms