RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 FKBPLQ9UIM3 349 aa13.75□□□□□ -0.21
ZNF541-202ENST00000314121 ROBO1Q9Y6N7 1651 aa13.75□□□□□ -0.21
ZNF541-202ENST00000314121 A0A088AWK7 358 aa13.75□□□□□ -0.21
ZNF541-202ENST00000314121 A0A1B0GVM2 712 aa13.75□□□□□ -0.21
ZNF541-202ENST00000314121 TCAF2A6NFQ2 919 aa13.75□□□□□ -0.21
ZNF541-202ENST00000314121 FPGTO14772 594 aa13.75□□□□□ -0.21
ZNF541-202ENST00000314121 AREL1O15033 823 aa13.75□□□□□ -0.21
ZNF541-202ENST00000314121 WBP4O75554 376 aaKnown RBP13.75□□□□□ -0.21
ZNF541-202ENST00000314121 F7P08709 466 aaPredicted RBP13.75□□□□□ -0.21
ZNF541-202ENST00000314121 PABPC4LP0CB38 370 aaKnown RBP13.75□□□□□ -0.21
ZNF541-202ENST00000314121 ITPKAP23677 461 aa13.75□□□□□ -0.21
ZNF541-202ENST00000314121 SLC34A3Q8N130 599 aa13.75□□□□□ -0.21
ZNF541-202ENST00000314121 SCAMP5Q8TAC9 235 aa13.75□□□□□ -0.21
ZNF541-202ENST00000314121 USP7Q93009 1102 aa13.75□□□□□ -0.21
ZNF541-202ENST00000314121 ZNF607Q96SK3 696 aa13.75□□□□□ -0.21
ZNF541-202ENST00000314121 KIFC1Q9BW19 673 aa13.75□□□□□ -0.21
ZNF541-202ENST00000314121 GDAP2Q9NXN4 497 aa13.75□□□□□ -0.21
ZNF541-202ENST00000314121 PQBP1O60828 265 aaKnown RBP13.74□□□□□ -0.21
ZNF541-202ENST00000314121 COL6A1P12109 1028 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 GNAZP19086 355 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 GSK3BP49841 420 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 CDH4P55283 916 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 INHBEP58166 350 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 ARHGAP1Q07960 439 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 FOXM1Q08050 763 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 TRIM71Q2Q1W2 868 aaKnown RBP13.74□□□□□ -0.21
ZNF541-202ENST00000314121 HFE2Q6ZVN8 426 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 AMIGO3Q86WK7 504 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 OR9I1Q8NGQ6 314 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 TTPALQ9BTX7 342 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 GIN1Q9NXP7 522 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 ITM2BQ9Y287 266 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 NUP188Q5SRE5 1749 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 AIREO43918 545 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 IL1BP01584 269 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 TCF3P15923 654 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 MAGP20916 626 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 NDUFA5Q16718 116 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 UBAP2Q5T6F2 1119 aaKnown RBP13.74□□□□□ -0.21
ZNF541-202ENST00000314121 SLC24A5Q71RS6 500 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.74□□□□□ -0.21
ZNF541-202ENST00000314121 DNAJB8Q8NHS0 232 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 AARSD1Q9BTE6 412 aaKnown RBP13.74□□□□□ -0.21
ZNF541-202ENST00000314121 RBPJLQ9UBG7 517 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 SCN11AQ9UI33 1791 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 TRAV19A0A0A6YYK7 116 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 OR51F1A6NGY5 319 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 ADAMDEC1O15204 470 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 CYP7B1O75881 506 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 CDH1P12830 882 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 S100A1P23297 94 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 PSMA1P25786 263 aaKnown RBP13.74□□□□□ -0.21
ZNF541-202ENST00000314121 SPAM1P38567 509 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 RPS14P62263 151 aaKnown RBP13.74□□□□□ -0.21
ZNF541-202ENST00000314121 OLIG2Q13516 323 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 LIX1Q8N485 282 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 TTC29Q8NA56 475 aaPredicted RBP13.74□□□□□ -0.21
ZNF541-202ENST00000314121 OR5K1Q8NHB7 308 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 FEM1AQ9BSK4 669 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 FNIP2Q9P278 1114 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 DPP7Q9UHL4 492 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 LYVE1Q9Y5Y7 322 aa13.74□□□□□ -0.21
ZNF541-202ENST00000314121 TNFRSF11BO00300 401 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 CCNKO75909 580 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 CORO1AP31146 461 aaKnown RBP13.73□□□□□ -0.21
ZNF541-202ENST00000314121 CSNK2BP67870 215 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 IKBKEQ14164 716 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 TAF1AQ15573 450 aaPredicted RBP13.73□□□□□ -0.21
ZNF541-202ENST00000314121 TIGD5Q53EQ6 642 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 PYDC2Q56P42 97 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 SH3D19Q5HYK7 790 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 ZNF544Q6NX49 715 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 MSANTD2Q6P1R3 559 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.73□□□□□ -0.21
ZNF541-202ENST00000314121 OR4A15Q8NGL6 344 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 PIH1D2Q8WWB5 315 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 AASDHPPTQ9NRN7 309 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 MYH7BA7E2Y1 1941 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 BHMG1C9JSJ3 638 aaPredicted RBP13.73□□□□□ -0.21
ZNF541-202ENST00000314121 ZDHHC20Q5W0Z9 365 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 MACC1Q6ZN28 852 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 OR13C4Q8NGS5 318 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 FAR1Q8WVX9 515 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 CDKN2AIPNLQ96HQ2 116 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 FNDC11Q9BVV2 318 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 TPK1Q9H3S4 243 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 HIPK3Q9H422 1215 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 PTGFRNQ9P2B2 879 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 A0A0G2JLL6 359 aaPredicted RBP13.73□□□□□ -0.21
ZNF541-202ENST00000314121 KERAO60938 352 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 SLC10A7Q0GE19 358 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 RBM48Q5RL73 367 aaKnown RBP13.73□□□□□ -0.21
ZNF541-202ENST00000314121 RBM20Q5T481 1227 aaKnown RBP13.73□□□□□ -0.21
ZNF541-202ENST00000314121 DOK6Q6PKX4 331 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 PLET1Q6UQ28 207 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 PRRT2Q7Z6L0 340 aaPredicted RBP13.73□□□□□ -0.21
ZNF541-202ENST00000314121 SIDT2Q8NBJ9 832 aaKnown RBP13.73□□□□□ -0.21
ZNF541-202ENST00000314121 ZNF671Q8TAW3 534 aa13.73□□□□□ -0.21
ZNF541-202ENST00000314121 FUBP3Q96I24 572 aaKnown RBP eCLIP13.73□□□□□ -0.21
ZNF541-202ENST00000314121 SGK2Q9HBY8 427 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms