RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 ACTR3BQ9P1U1 418 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 OAZ3Q9UMX2 235 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 PCDHA2Q9Y5H9 948 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 E9PAM4 449 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 MT-ND1P03886 318 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 RPL4P36578 427 aaKnown RBP13.03□□□□□ -0.32
SNED1-201ENST00000310397 RORCP51449 518 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 NRG1Q02297 640 aaPredicted RBP13.03□□□□□ -0.32
SNED1-201ENST00000310397 SULT2A1Q06520 285 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 DNAJB7Q7Z6W7 309 aaPredicted RBP13.03□□□□□ -0.32
SNED1-201ENST00000310397 GSDMCQ9BYG8 508 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 DNAJC11Q9NVH1 559 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 TBCCD1Q9NVR7 557 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 PCDHGB3Q9Y5G1 929 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 CNTNAP1P78357 1384 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 TRIP11Q15643 1979 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 SMIM35A0A1B0GVV1 85 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 CXCR6O00574 342 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 METTL18O95568 372 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 NDST2P52849 883 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 TUBA3CQ13748 450 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 E2F2Q14209 437 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 PPM1LQ5SGD2 360 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 TUBA3EQ6PEY2 450 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 HID1Q8IV36 788 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 MPP5Q8N3R9 675 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 A0A1W2PQ67 120 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 STX16-NPEPL1H3BU86 382 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 STX16O14662 325 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 AQP1P29972 269 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 PEX6Q13608 980 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 FAM174BQ3ZCQ3 159 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 CAPN13Q6MZZ7 669 aaPredicted RBP13.03□□□□□ -0.32
SNED1-201ENST00000310397 B3GALT6Q96L58 329 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 GPR21Q99679 349 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 LMAN2LQ9H0V9 348 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 ANKRA2Q9H9E1 313 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 CNOT6Q9ULM6 557 aaKnown RBP13.03□□□□□ -0.32
SNED1-201ENST00000310397 PIP5K1BO14986 540 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 XYLBO75191 536 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 TPTEP56180 551 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 DAG1Q14118 895 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 CA9Q16790 459 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 AGMOQ6ZNB7 445 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 PRR23CQ6ZRP0 262 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 OR8H1Q8NGG4 311 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 EXOC2Q96KP1 924 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 MOXD2PA6NHM9 499 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 TBX1O43435 398 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 ATF6P18850 670 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 CYP3A5P20815 502 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 TMEM44Q2T9K0 475 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 SLC9B1Q4ZJI4 515 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 GBA2Q9HCG7 927 aaPredicted RBP13.03□□□□□ -0.32
SNED1-201ENST00000310397 ANKHQ9HCJ1 492 aa13.03□□□□□ -0.32
SNED1-201ENST00000310397 RGPD5Q99666 1765 aa13.02□□□□□ -0.32
SNED1-201ENST00000310397 CDH4P55283 916 aa13.02□□□□□ -0.32
SNED1-201ENST00000310397 CLHC1Q8NHS4 586 aa13.02□□□□□ -0.32
SNED1-201ENST00000310397 APOLD1Q96LR9 279 aa13.02□□□□□ -0.32
SNED1-201ENST00000310397 FZD10Q9ULW2 581 aa13.02□□□□□ -0.32
SNED1-201ENST00000310397 FAM159BA6NKW6 160 aa13.02□□□□□ -0.32
SNED1-201ENST00000310397 KERAO60938 352 aa13.02□□□□□ -0.32
SNED1-201ENST00000310397 TMEM63AO94886 807 aa13.02□□□□□ -0.32
SNED1-201ENST00000310397 CYP11A1P05108 521 aa13.02□□□□□ -0.32
SNED1-201ENST00000310397 FNDC3BQ53EP0 1204 aaKnown RBP13.02□□□□□ -0.32
SNED1-201ENST00000310397 LGR5O75473 907 aa13.02□□□□□ -0.32
SNED1-201ENST00000310397 MTRF1O75570 445 aaKnown RBP13.02□□□□□ -0.32
SNED1-201ENST00000310397 GPR1P46091 355 aa13.02□□□□□ -0.32
SNED1-201ENST00000310397 GDF10P55107 478 aa13.02□□□□□ -0.32
SNED1-201ENST00000310397 EEFSECP57772 596 aaKnown RBP13.02□□□□□ -0.32
SNED1-201ENST00000310397 SRSF11Q05519 484 aaKnown RBP13.02□□□□□ -0.32
SNED1-201ENST00000310397 RGS1Q08116 209 aa13.02□□□□□ -0.32
SNED1-201ENST00000310397 HNRNPDQ14103 355 aaKnown RBP13.02□□□□□ -0.32
SNED1-201ENST00000310397 TSTD2Q5T7W7 516 aa13.02□□□□□ -0.32
SNED1-201ENST00000310397 ESRP1Q6NXG1 681 aaKnown RBP13.02□□□□□ -0.32
SNED1-201ENST00000310397 GRIN3AQ8TCU5 1115 aa13.02□□□□□ -0.32
SNED1-201ENST00000310397 C8orf48Q96LL4 319 aa13.02□□□□□ -0.32
SNED1-201ENST00000310397 CARD8Q9Y2G2 431 aa13.02□□□□□ -0.32
SNED1-201ENST00000310397 HDCP19113 662 aa13.02□□□□□ -0.33
SNED1-201ENST00000310397 CREMQ03060 361 aa13.02□□□□□ -0.33
SNED1-201ENST00000310397 TAF13Q15543 124 aa13.02□□□□□ -0.33
SNED1-201ENST00000310397 THOC7Q6I9Y2 204 aaKnown RBP13.02□□□□□ -0.33
SNED1-201ENST00000310397 ITFG2Q969R8 447 aa13.02□□□□□ -0.33
SNED1-201ENST00000310397 TMEM209Q96SK2 561 aa13.02□□□□□ -0.33
SNED1-201ENST00000310397 CKLFQ9UBR5 152 aa13.02□□□□□ -0.33
SNED1-201ENST00000310397 BAIAP2Q9UQB8 552 aa13.02□□□□□ -0.33
SNED1-201ENST00000310397 SLC25A14O95258 325 aaPredicted RBP13.02□□□□□ -0.33
SNED1-201ENST00000310397 RNASE11Q8TAA1 199 aaKnown RBP13.02□□□□□ -0.33
SNED1-201ENST00000310397 ERMAPQ96PL5 475 aaPredicted RBP13.02□□□□□ -0.33
SNED1-201ENST00000310397 GMIPQ9P107 970 aa13.02□□□□□ -0.33
SNED1-201ENST00000310397 MAFBQ9Y5Q3 323 aaPredicted RBP13.02□□□□□ -0.33
SNED1-201ENST00000310397 RPIAP49247 311 aa13.02□□□□□ -0.33
SNED1-201ENST00000310397 RHDQ02161 417 aa13.02□□□□□ -0.33
SNED1-201ENST00000310397 ABRQ12979 859 aa13.02□□□□□ -0.33
SNED1-201ENST00000310397 TIGD6Q17RP2 521 aa13.02□□□□□ -0.33
SNED1-201ENST00000310397 KLHL22Q53GT1 634 aa13.02□□□□□ -0.33
SNED1-201ENST00000310397 ZBTB8BQ8NAP8 495 aaPredicted RBP13.02□□□□□ -0.33
SNED1-201ENST00000310397 SLC13A3Q8WWT9 602 aa13.02□□□□□ -0.33
SNED1-201ENST00000310397 MYO19Q96H55 970 aa13.02□□□□□ -0.33
SNED1-201ENST00000310397 HAPLN3Q96S86 360 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms