RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 NPEPPSL1A6NEC2 478 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 TBC1D3FA6NER0 549 aaPredicted RBP17.26■□□□□ 0.35
KRT28-201ENST00000306658 NEMP2A6NFY4 417 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 ERICH4A6NGS2 130 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 TBC1D3LB9A6J9 549 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 ATG13O75143 517 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 CDK14O94921 469 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 SNUPNO95149 360 aaKnown RBP17.26■□□□□ 0.35
KRT28-201ENST00000306658 HSPA4LO95757 839 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 TBC1D3HP0C7X1 549 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 SERPINB5P36952 375 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 ADPRHP54922 357 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 ZP2Q05996 745 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 SF3A3Q12874 501 aaKnown RBP eCLIP17.26■□□□□ 0.35
KRT28-201ENST00000306658 MAP7D1Q3KQU3 841 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 ACSBG2Q5FVE4 666 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 PLEKHS1Q5SXH7 462 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 ZNF648Q5T619 568 aaPredicted RBP17.26■□□□□ 0.35
KRT28-201ENST00000306658 SEL1L3Q68CR1 1132 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 TBC1D3GQ6DHY5 549 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 TBC1D3CQ6IPX1 549 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 TRIM67Q6ZTA4 783 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 RAB44Q7Z6P3 723 aaPredicted RBP17.26■□□□□ 0.35
KRT28-201ENST00000306658 ADAMTSL2Q86TH1 951 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 SPATS2Q86XZ4 545 aaKnown RBP17.26■□□□□ 0.35
KRT28-201ENST00000306658 TBC1D3Q8IZP1 549 aaPredicted RBP17.26■□□□□ 0.35
KRT28-201ENST00000306658 CCNYL1Q8N7R7 359 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 RASGEF1AQ8N9B8 481 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 MAFAQ8NHW3 353 aaPredicted RBP17.26■□□□□ 0.35
KRT28-201ENST00000306658 EXT2Q93063 718 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 FUBP1Q96AE4 644 aaKnown RBP17.26■□□□□ 0.35
KRT28-201ENST00000306658 PHF21BQ96EK2 531 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 HIC2Q96JB3 615 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 C1QTNF7Q9BXJ2 289 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 C1QTNF2Q9BXJ5 285 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 DRC3Q9H069 523 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 ZNF395Q9H8N7 513 aaPredicted RBP17.26■□□□□ 0.35
KRT28-201ENST00000306658 NPHS2Q9NP85 383 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 MBD1Q9UIS9 605 aaPredicted RBP17.26■□□□□ 0.35
KRT28-201ENST00000306658 FBXL21Q9UKT6 434 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 OR2AG2A6NM03 316 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 SUPT3HB4E1H0 165 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 NPHS1O60500 1241 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 SUPT3HO75486 399 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 LYPLA1O75608 230 aaPredicted RBP17.26■□□□□ 0.35
KRT28-201ENST00000306658 GFAPP14136 432 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 NDUFV2P19404 249 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 IMPDH1P20839 514 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 DGKEP52429 567 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 GTF2H3Q13889 308 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 RCN2Q14257 317 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 WSCD2Q2TBF2 565 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 GPSM1Q86YR5 675 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 PIWIL2Q8TC59 973 aaKnown RBP17.26■□□□□ 0.35
KRT28-201ENST00000306658 ASZ1Q8WWH4 475 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 THOC1Q96FV9 657 aaKnown RBP17.26■□□□□ 0.35
KRT28-201ENST00000306658 ZNF514Q96K75 400 aaPredicted RBP17.26■□□□□ 0.35
KRT28-201ENST00000306658 CNDP1Q96KN2 507 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 FAM126AQ9BYI3 521 aaPredicted RBP17.26■□□□□ 0.35
KRT28-201ENST00000306658 LMAN1LQ9HAT1 526 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 CYP4F12Q9HCS2 524 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 PRDM6Q9NQX0 595 aa17.26■□□□□ 0.35
KRT28-201ENST00000306658 ZFR2Q9UPR6 939 aaKnown RBP17.26■□□□□ 0.35
KRT28-201ENST00000306658 A0A1W2PQU0 124 aa17.25■□□□□ 0.35
KRT28-201ENST00000306658 PRR23AA6NEV1 266 aa17.25■□□□□ 0.35
KRT28-201ENST00000306658 CHURC1-FNTBB4DL54 471 aa17.25■□□□□ 0.35
KRT28-201ENST00000306658 UBXN8O00124 270 aa17.25■□□□□ 0.35
KRT28-201ENST00000306658 SGTAO43765 313 aa17.25■□□□□ 0.35
KRT28-201ENST00000306658 VEGFDO43915 354 aa17.25■□□□□ 0.35
KRT28-201ENST00000306658 RNGTTO60942 597 aaKnown RBP17.25■□□□□ 0.35
KRT28-201ENST00000306658 PAK4O96013 591 aaPredicted RBP17.25■□□□□ 0.35
KRT28-201ENST00000306658 MTHFD2P13995 350 aa17.25■□□□□ 0.35
KRT28-201ENST00000306658 TEAD1P28347 426 aa17.25■□□□□ 0.35
KRT28-201ENST00000306658 PRLHRP49683 370 aa17.25■□□□□ 0.35
KRT28-201ENST00000306658 HSPA14Q0VDF9 509 aa17.25■□□□□ 0.35
KRT28-201ENST00000306658 TMEM259Q4ZIN3 620 aa17.25■□□□□ 0.35
KRT28-201ENST00000306658 TMEM220Q6QAJ8 160 aa17.25■□□□□ 0.35
KRT28-201ENST00000306658 HORMAD1Q86X24 394 aa17.25■□□□□ 0.35
KRT28-201ENST00000306658 WDR75Q8IWA0 830 aaKnown RBP17.25■□□□□ 0.35
KRT28-201ENST00000306658 PLA2G15Q8NCC3 412 aa17.25■□□□□ 0.35
KRT28-201ENST00000306658 ELMO1Q92556 727 aa17.25■□□□□ 0.35
KRT28-201ENST00000306658 LENG8Q96PV6 779 aaPredicted RBP17.25■□□□□ 0.35
KRT28-201ENST00000306658 NELL2Q99435 816 aa17.25■□□□□ 0.35
KRT28-201ENST00000306658 SORT1Q99523 831 aa17.25■□□□□ 0.35
KRT28-201ENST00000306658 CCM2Q9BSQ5 444 aa17.25■□□□□ 0.35
KRT28-201ENST00000306658 SLC17A9Q9BYT1 436 aa17.25■□□□□ 0.35
KRT28-201ENST00000306658 ILKAPQ9H0C8 392 aaPredicted RBP17.25■□□□□ 0.35
KRT28-201ENST00000306658 IKZF3Q9UKT9 509 aa17.25■□□□□ 0.35
KRT28-201ENST00000306658 PCCBP05166 539 aa17.24■□□□□ 0.35
KRT28-201ENST00000306658 GABRG2P18507 467 aa17.24■□□□□ 0.35
KRT28-201ENST00000306658 CTSCP53634 463 aa17.24■□□□□ 0.35
KRT28-201ENST00000306658 STARD6P59095 220 aa17.24■□□□□ 0.35
KRT28-201ENST00000306658 HERVK_113P63132 956 aa17.24■□□□□ 0.35
KRT28-201ENST00000306658 BOP1Q14137 746 aaKnown RBP17.24■□□□□ 0.35
KRT28-201ENST00000306658 PFKFB4Q16877 469 aa17.24■□□□□ 0.35
KRT28-201ENST00000306658 Q6ZS52 159 aa17.24■□□□□ 0.35
KRT28-201ENST00000306658 FRA10AC1Q70Z53 315 aa17.24■□□□□ 0.35
KRT28-201ENST00000306658 SYT13Q7L8C5 426 aa17.24■□□□□ 0.35
KRT28-201ENST00000306658 ADGRG6Q86SQ4 1221 aa17.24■□□□□ 0.35
KRT28-201ENST00000306658 FAM124AQ86V42 546 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms