RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 FKBP1BP68106 108 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 HKDC1Q2TB90 917 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 CHST9Q7L1S5 443 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 CPNE9Q8IYJ1 553 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 OR10A6Q8NH74 314 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 ZNF354BQ96LW1 612 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 NEK6Q9HC98 313 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 ING3Q9NXR8 418 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 IGSF9Q9P2J2 1179 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 MRPS33Q9Y291 106 aaKnown RBP13.8□□□□□ -0.2
PRKCB-201ENST00000303531 CCL16O15467 120 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 TLL1O43897 1013 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 C22orf31O95567 290 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 FECHP22830 423 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 GALNT8Q9NY28 637 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 TRPS1Q9UHF7 1281 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 SOWAHBA6NEL2 793 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 FADS2P1A8MWK0 482 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 PITRM1Q5JRX3 1037 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 ANKRD23Q86SG2 305 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 ZNF554Q86TJ5 538 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 ZDHHC18Q9NUE0 388 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 POMPQ9Y244 141 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 SCELO95171 688 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 TAS2R39P59534 338 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 KLHL24Q6TFL4 600 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 FETUBQ9UGM5 382 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 YJEFN3A6XGL0 299 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 PER2O15055 1255 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 FFAR2O15552 330 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 USP2O75604 605 aaPredicted RBP13.79□□□□□ -0.2
PRKCB-201ENST00000303531 IFNW1P05000 195 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 SELPP16109 830 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 CHIT1Q13231 466 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 BLMHQ13867 455 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 HNRNPDQ14103 355 aaKnown RBP13.79□□□□□ -0.2
PRKCB-201ENST00000303531 ASTE1Q2TB18 679 aaPredicted RBP13.79□□□□□ -0.2
PRKCB-201ENST00000303531 ZNF572Q7Z3I7 529 aaPredicted RBP13.79□□□□□ -0.2
PRKCB-201ENST00000303531 C11orf65Q8NCR3 313 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 LPIN3Q9BQK8 851 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 EBF4Q9BQW3 602 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 BRINP2Q9C0B6 783 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 FAM83DQ9H4H8 585 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 ABCB9Q9NP78 766 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 PHPT1Q9NRX4 125 aaPredicted RBP13.79□□□□□ -0.2
PRKCB-201ENST00000303531 CLEC4AQ9UMR7 237 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 AP2A2O94973 939 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 SAGP10523 405 aaPredicted RBP13.79□□□□□ -0.2
PRKCB-201ENST00000303531 SMPD1P17405 629 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 NR4A1P22736 598 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 ITPKBP27987 946 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 IL10RBQ08334 325 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 ZNF697Q5TEC3 545 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 MED27Q6P2C8 311 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 BTN2A1Q7KYR7 527 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.79□□□□□ -0.2
PRKCB-201ENST00000303531 EBF3Q9H4W6 596 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 SUCOQ9UBS9 1254 aaKnown RBP13.79□□□□□ -0.2
PRKCB-201ENST00000303531 MSRAQ9UJ68 235 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 IRAK3Q9Y616 596 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 H3BNH8 94 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 SEPHS1P49903 392 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 IL18Q14116 193 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 SULT1C3Q6IMI6 304 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 TMPRSS11AQ6ZMR5 421 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 OAFQ86UD1 273 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 ZNF563Q8TA94 476 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 WRAP73Q9P2S5 460 aaPredicted RBP13.79□□□□□ -0.2
PRKCB-201ENST00000303531 COQ4Q9Y3A0 265 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 ERN1O75460 977 aaKnown RBP13.79□□□□□ -0.2
PRKCB-201ENST00000303531 FGF19O95750 216 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 IRF9Q00978 393 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 BRSK1Q8TDC3 778 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 ESAMQ96AP7 390 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 TBC1D14Q9P2M4 693 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 NR2E3Q9Y5X4 410 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 GRIN2DO15399 1336 aa13.79□□□□□ -0.2
PRKCB-201ENST00000303531 LAG3P18627 525 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 ELP6Q0PNE2 266 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 KCNA10Q16322 511 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 RNASE12Q5GAN4 147 aaKnown RBP13.78□□□□□ -0.2
PRKCB-201ENST00000303531 EGFLAMQ63HQ2 1017 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 CFAP206Q8IYR0 622 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 C10orf82Q8WW14 230 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 hCG_2039718K7EN88 272 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 ADAMTS3O15072 1205 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 PSMD8P48556 350 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 CYP4F8P98187 520 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 DEC1Q9P2X7 70 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 PCDHGB3Q9Y5G1 929 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 OAS3Q9Y6K5 1087 aaKnown RBP13.78□□□□□ -0.2
PRKCB-201ENST00000303531 KRT33AO76009 404 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 ASLP04424 464 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 YAP1P46937 504 aaKnown RBP13.78□□□□□ -0.2
PRKCB-201ENST00000303531 FUT10Q6P4F1 479 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 NIPA2Q8N8Q9 360 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 WRAP53Q9BUR4 548 aaKnown RBP13.78□□□□□ -0.2
PRKCB-201ENST00000303531 SLC7A4O43246 635 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 SRSF11Q05519 484 aaKnown RBP13.78□□□□□ -0.2
PRKCB-201ENST00000303531 PTPRJQ12913 1337 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms