RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 PAPPA2Q9BXP8 1791 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 DLX3O60479 287 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 RECQL5O94762 991 aaPredicted RBP10.05□□□□□ -0.8
GABRB3-201ENST00000299267 UNC5CO95185 931 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 KELP23276 732 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 HMGCS1Q01581 520 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 TCEAL5Q5H9L2 206 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 CLNKQ7Z7G1 428 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 KRT78Q8N1N4 520 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 FBXO30Q8TB52 745 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 RDH11Q8TC12 318 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 C19orf60Q96EN9 201 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 PGAP3Q96FM1 320 aaPredicted RBP10.05□□□□□ -0.8
GABRB3-201ENST00000299267 FZD3Q9NPG1 666 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 DNAJC11Q9NVH1 559 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 SIRPGQ9P1W8 387 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 CA14Q9ULX7 337 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 DOCK1Q14185 1865 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 NCOR1O75376 2440 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 EDDM13A0A1B0GTR0 161 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 ZNF8P17098 575 aaPredicted RBP10.05□□□□□ -0.8
GABRB3-201ENST00000299267 ME2P23368 584 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 PIK3R1P27986 724 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 ZNF789Q5FWF6 425 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 ANKRD46Q86W74 232 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 TXNDC5Q8NBS9 432 aaKnown RBP10.05□□□□□ -0.8
GABRB3-201ENST00000299267 PHC3Q8NDX5 983 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 EBPLQ9BY08 206 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 NSUN3Q9H649 340 aaKnown RBP10.05□□□□□ -0.8
GABRB3-201ENST00000299267 TRIM45Q9H8W5 580 aaPredicted RBP10.05□□□□□ -0.8
GABRB3-201ENST00000299267 CDH22Q9UJ99 828 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 MRPS17Q9Y2R5 130 aaKnown RBP10.05□□□□□ -0.8
GABRB3-201ENST00000299267 ZW10O43264 779 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 LATO43561 262 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 PRAMEF12O95522 483 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 CHRM1P11229 460 aaPredicted RBP10.05□□□□□ -0.8
GABRB3-201ENST00000299267 CCND1P24385 295 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 CRATP43155 626 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 SGSHP51688 502 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 STC1P52823 247 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 MAD2L1Q13257 205 aaPredicted RBP10.05□□□□□ -0.8
GABRB3-201ENST00000299267 MED21Q13503 144 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 VPS26BQ4G0F5 336 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 TBCELQ5QJ74 424 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 IL23RQ5VWK5 629 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 FAM129CQ86XR2 697 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 LCN9Q8WX39 176 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 DNAJC9Q8WXX5 260 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 NSMCE2Q96MF7 247 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 LENG8Q96PV6 779 aaPredicted RBP10.05□□□□□ -0.8
GABRB3-201ENST00000299267 ZDHHC3Q9NYG2 299 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 FNIP2Q9P278 1114 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 GIMAP2Q9UG22 337 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 PPM1HQ9ULR3 514 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 SPO11Q9Y5K1 396 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 HHLA1C9JL84 531 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 PIP5K1BO14986 540 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 PRKCHP24723 683 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 TGM3Q08188 693 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 GTF2H2Q13888 395 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 PRAMEF14Q5SWL7 426 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 NADSYN1Q6IA69 706 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 GTF2H2CQ6P1K8 395 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 TXNDC11Q6PKC3 985 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 KLF16Q9BXK1 252 aaPredicted RBP10.05□□□□□ -0.8
GABRB3-201ENST00000299267 TDRD1Q9BXT4 1180 aaKnown RBP10.05□□□□□ -0.8
GABRB3-201ENST00000299267 YY1AP1Q9H869 796 aa10.05□□□□□ -0.8
GABRB3-201ENST00000299267 C6orf203Q9P0P8 240 aaPredicted RBP10.05□□□□□ -0.8
GABRB3-201ENST00000299267 RGSL1A5PLK6 1076 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 TNFRSF10BO14763 440 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 FPGTO14772 594 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 SIN3BO75182 1162 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 ECI2O75521 394 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 SMNDC1O75940 238 aaKnown RBP eCLIP10.04□□□□□ -0.8
GABRB3-201ENST00000299267 ALDOAP04075 364 aaKnown RBP10.04□□□□□ -0.8
GABRB3-201ENST00000299267 ATP6V1B1P15313 513 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 AQP1P29972 269 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 MTHFRP42898 656 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 SLC6A11P48066 632 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 NEK2P51955 445 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 PLA2G16P53816 162 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 C21orf59P57076 290 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 LCP2Q13094 533 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 LSM12Q3MHD2 195 aaKnown RBP10.04□□□□□ -0.8
GABRB3-201ENST00000299267 ZDHHC20Q5W0Z9 365 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 PRSS58Q8IYP2 241 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 TPSD1Q9BZJ3 242 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 BTBD1Q9H0C5 482 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 DNAJC28Q9NX36 388 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 SLC22A14Q9Y267 594 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 SCN1AP35498 2009 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 SRCP12931 536 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 VIPR1P32241 457 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 GCKP35557 465 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 SSR2P43308 183 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 IRX1P78414 480 aaPredicted RBP10.04□□□□□ -0.8
GABRB3-201ENST00000299267 KLF10Q13118 480 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 PON2Q15165 354 aa10.04□□□□□ -0.8
GABRB3-201ENST00000299267 INO80DQ53TQ3 878 aaPredicted RBP10.04□□□□□ -0.8
GABRB3-201ENST00000299267 DHFR2Q86XF0 187 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms