RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 VCANP13611 3396 aa24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 OR2AG2A6NM03 316 aa24.25■■□□□ 1.47
GTF2A1-201ENST00000298173 F8W8V4 182 aa24.25■■□□□ 1.47
GTF2A1-201ENST00000298173 TK2O00142 265 aa24.25■■□□□ 1.47
GTF2A1-201ENST00000298173 SLC31A1O15431 190 aa24.25■■□□□ 1.47
GTF2A1-201ENST00000298173 CPA3P15088 417 aa24.25■■□□□ 1.47
GTF2A1-201ENST00000298173 TFEBP19484 476 aa24.25■■□□□ 1.47
GTF2A1-201ENST00000298173 TAC1P20366 129 aa24.25■■□□□ 1.47
GTF2A1-201ENST00000298173 IGFALSP35858 605 aa24.25■■□□□ 1.47
GTF2A1-201ENST00000298173 GBX1Q14549 363 aa24.25■■□□□ 1.47
GTF2A1-201ENST00000298173 BCL7AQ4VC05 210 aa24.25■■□□□ 1.47
GTF2A1-201ENST00000298173 TMEM220Q6QAJ8 160 aa24.25■■□□□ 1.47
GTF2A1-201ENST00000298173 OTOAQ7RTW8 1153 aa24.25■■□□□ 1.47
GTF2A1-201ENST00000298173 CCDC63Q8NA47 563 aa24.25■■□□□ 1.47
GTF2A1-201ENST00000298173 DENND6BQ8NEG7 585 aa24.25■■□□□ 1.47
GTF2A1-201ENST00000298173 RHEBL1Q8TAI7 183 aa24.25■■□□□ 1.47
GTF2A1-201ENST00000298173 EDAQ92838 391 aa24.25■■□□□ 1.47
GTF2A1-201ENST00000298173 SCYL1Q96KG9 808 aa24.25■■□□□ 1.47
GTF2A1-201ENST00000298173 ZNF317Q96PQ6 595 aaPredicted RBP24.25■■□□□ 1.47
GTF2A1-201ENST00000298173 IKZF3Q9UKT9 509 aa24.25■■□□□ 1.47
GTF2A1-201ENST00000298173 CD6P30203 668 aa24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 ALDH3A1P30838 453 aa24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 ACSBG2Q5FVE4 666 aa24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 BEND7Q8N7W2 519 aaPredicted RBP24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 ZNF75CPQ92670 426 aaPredicted RBP24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 KIAA1191Q96A73 305 aa24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 LINGO1Q96FE5 620 aa24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 GPR34Q9UPC5 381 aa24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 CHUKO15111 745 aa24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 FTH1P02794 183 aa24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 ZNF8P17098 575 aaPredicted RBP24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 DGKAP23743 735 aa24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 CCR5P51681 352 aa24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 ZNF658BQ4V348 819 aaPredicted RBP24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 CWF19L1Q69YN2 538 aaKnown RBP24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 ZYG11AQ6WRX3 759 aa24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 CYHR1Q6ZMK1 362 aa24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 NUDCD3Q8IVD9 361 aa24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 ZNF514Q96K75 400 aaPredicted RBP24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 LINC00615Q96LM1 132 aaPredicted RBP24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 TSSK1BQ9BXA7 367 aa24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 FAM126AQ9BYI3 521 aaPredicted RBP24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 C6orf106Q9H6K1 298 aaPredicted RBP24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 WDR26Q9H7D7 661 aa24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 EBF2Q9HAK2 575 aa24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 OR1A2Q9Y585 309 aa24.24■■□□□ 1.47
GTF2A1-201ENST00000298173 IGHV1OR15-9A0A0B4J2B8 117 aa24.23■■□□□ 1.47
GTF2A1-201ENST00000298173 CCDC189A1A4V9 331 aa24.23■■□□□ 1.47
GTF2A1-201ENST00000298173 EIF3FO00303 357 aaPredicted RBP24.23■■□□□ 1.47
GTF2A1-201ENST00000298173 KPNA5O15131 536 aa24.23■■□□□ 1.47
GTF2A1-201ENST00000298173 IGHV4-34P06331 123 aa24.23■■□□□ 1.47
GTF2A1-201ENST00000298173 CBSLP0DN79 551 aa24.23■■□□□ 1.47
GTF2A1-201ENST00000298173 KCNA4P22459 653 aa24.23■■□□□ 1.47
GTF2A1-201ENST00000298173 CBSP35520 551 aa24.23■■□□□ 1.47
GTF2A1-201ENST00000298173 CXCL12P48061 93 aa24.23■■□□□ 1.47
GTF2A1-201ENST00000298173 NAPRTQ6XQN6 538 aa24.23■■□□□ 1.47
GTF2A1-201ENST00000298173 ZNF547Q8IVP9 402 aa24.23■■□□□ 1.47
GTF2A1-201ENST00000298173 C10orf107Q8IVU9 208 aa24.23■■□□□ 1.47
GTF2A1-201ENST00000298173 FRMD1Q8N878 549 aa24.23■■□□□ 1.47
GTF2A1-201ENST00000298173 OR6Y1Q8NGX8 325 aa24.23■■□□□ 1.47
GTF2A1-201ENST00000298173 CCM2Q9BSQ5 444 aa24.23■■□□□ 1.47
GTF2A1-201ENST00000298173 TPSD1Q9BZJ3 242 aa24.23■■□□□ 1.47
GTF2A1-201ENST00000298173 ALG9Q9H6U8 611 aa24.23■■□□□ 1.47
GTF2A1-201ENST00000298173 MANSC1Q9H8J5 431 aa24.23■■□□□ 1.47
GTF2A1-201ENST00000298173 FZD3Q9NPG1 666 aa24.23■■□□□ 1.47
GTF2A1-201ENST00000298173 GULP1Q9UBP9 304 aa24.23■■□□□ 1.47
GTF2A1-201ENST00000298173 MID2Q9UJV3 735 aa24.23■■□□□ 1.47
GTF2A1-201ENST00000298173 CDYLQ9Y232 598 aa24.23■■□□□ 1.47
GTF2A1-201ENST00000298173 TMEM98Q9Y2Y6 226 aa24.23■■□□□ 1.47
GTF2A1-201ENST00000298173 K7ESF4 209 aa24.22■■□□□ 1.47
GTF2A1-201ENST00000298173 PI15O43692 258 aa24.22■■□□□ 1.47
GTF2A1-201ENST00000298173 GPC4O75487 556 aa24.22■■□□□ 1.47
GTF2A1-201ENST00000298173 PDGFBP01127 241 aaPredicted RBP24.22■■□□□ 1.47
GTF2A1-201ENST00000298173 HOXC4P09017 264 aaPredicted RBP24.22■■□□□ 1.47
GTF2A1-201ENST00000298173 MAGEA9P43362 315 aa24.22■■□□□ 1.47
GTF2A1-201ENST00000298173 SEC24CP53992 1094 aa24.22■■□□□ 1.47
GTF2A1-201ENST00000298173 OR4D1Q15615 310 aa24.22■■□□□ 1.47
GTF2A1-201ENST00000298173 TTLL9Q3SXZ7 439 aa24.22■■□□□ 1.47
GTF2A1-201ENST00000298173 PLEKHS1Q5SXH7 462 aa24.22■■□□□ 1.47
GTF2A1-201ENST00000298173 KIAA0895LQ68EN5 471 aa24.22■■□□□ 1.47
GTF2A1-201ENST00000298173 RLN3Q8WXF3 142 aa24.22■■□□□ 1.47
GTF2A1-201ENST00000298173 ATOH8Q96SQ7 321 aa24.22■■□□□ 1.47
GTF2A1-201ENST00000298173 APOOQ9BUR5 198 aa24.22■■□□□ 1.47
GTF2A1-201ENST00000298173 PHPT1Q9NRX4 125 aaPredicted RBP24.22■■□□□ 1.47
GTF2A1-201ENST00000298173 OXSMQ9NWU1 459 aa24.22■■□□□ 1.47
GTF2A1-201ENST00000298173 GMNCA6NCL1 334 aa24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 KLF11O14901 512 aa24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 NUAK1O60285 661 aa24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 DLX3O60479 287 aa24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 MYCLP1P12525 358 aaPredicted RBP24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 HNRNPA2B1P22626 353 aaKnown RBP24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 RGS4P49798 205 aa24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 STAG3L4Q8TBR4 150 aa24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 BMFQ96LC9 184 aa24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 EPN3Q9H201 632 aa24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 TECTAO75443 2155 aa24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 TMEM202A6NGA9 273 aa24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 TCP11X1B4DZS4 312 aa24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 CDC7O00311 574 aa24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 SLCO2B1O94956 709 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms