RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 IFT172Q9UG01 1749 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 GJA1P17302 382 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 TMC8Q8IU68 726 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 NUS1Q96E22 293 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 RBM18Q96H35 190 aaKnown RBP17.11■□□□□ 0.33
SHANK1-201ENST00000293441 OR2AG1Q9H205 316 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 IKBIPQ70UQ0 350 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 H7C0S8 307 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 TGDSO95455 350 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 STXBP1P61764 594 aaKnown RBP17.11■□□□□ 0.33
SHANK1-201ENST00000293441 RBBP4Q09028 425 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 SH3PXD2AQ5TCZ1 1133 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 VPS26BQ4G0F5 336 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 GLYATQ6IB77 296 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 HPS6Q86YV9 775 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 C12orf65Q9H3J6 166 aaKnown RBP17.1■□□□□ 0.33
SHANK1-201ENST00000293441 EIF2B4Q9UI10 523 aaKnown RBP17.1■□□□□ 0.33
SHANK1-201ENST00000293441 AVPR1BP47901 424 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 SULT1C3Q6IMI6 304 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 ENPP7Q6UWV6 458 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 SLC34A3Q8N130 599 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 ZMIZ2Q8NF64 920 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 TSTD1Q8NFU3 115 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 CARD16Q5EG05 197 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 BRSK1Q8TDC3 778 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 GPER1Q99527 375 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 MRPS30Q9NP92 439 aaKnown RBP17.1■□□□□ 0.33
SHANK1-201ENST00000293441 MCUBQ9NWR8 336 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 HEBP2Q9Y5Z4 205 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 UROSP10746 265 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 CTSKP43235 329 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 TMEM63BQ5T3F8 832 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 HGSNATQ68CP4 663 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 AHI1Q8N157 1196 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 TP53INP1Q96A56 240 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 TLR6Q9Y2C9 796 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 LTN1O94822 1766 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 EDF1O60869 148 aaKnown RBP17.1■□□□□ 0.33
SHANK1-201ENST00000293441 ARHGAP1Q07960 439 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 TPGS2Q68CL5 300 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 CNKSR3Q6P9H4 555 aa17.1■□□□□ 0.33
SHANK1-201ENST00000293441 PDP1Q9P0J1 537 aaPredicted RBP17.1■□□□□ 0.33
SHANK1-201ENST00000293441 S100GP29377 79 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 KCTD21Q4G0X4 260 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 AMER2Q8N7J2 671 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 BTBD3Q9Y2F9 522 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 OR4F21O95013 312 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 C8GP07360 202 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 PSMD7P51665 324 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 RGS8P57771 180 aaPredicted RBP17.09■□□□□ 0.33
SHANK1-201ENST00000293441 COMMD9Q9P000 198 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 HMGXB4Q9UGU5 601 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 PARP4Q9UKK3 1724 aaKnown RBP17.09■□□□□ 0.33
SHANK1-201ENST00000293441 IGKV6D-41A0A0C4DH26 115 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 TTC24A2A3L6 582 aaPredicted RBP17.09■□□□□ 0.33
SHANK1-201ENST00000293441 LIMK2P53671 638 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 CASP9P55211 416 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 ACTR3P61158 418 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 PIK3C3Q8NEB9 887 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 KCNS3Q9BQ31 491 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 FZD8Q9H461 694 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 GKN1Q9NS71 199 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 C9JVG2 144 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 PGM3O95394 542 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 SEC24AO95486 1093 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 CHRNB2P17787 502 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 NELFEP18615 380 aaKnown RBP17.09■□□□□ 0.33
SHANK1-201ENST00000293441 PBX1P40424 430 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 ECT2LQ008S8 904 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 PCDH1Q08174 1060 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 SOWAHAQ2M3V2 549 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 VWA5B1Q5TIE3 1220 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 AGAP2Q99490 1192 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 FAM124BQ9H5Z6 455 aaPredicted RBP17.09■□□□□ 0.33
SHANK1-201ENST00000293441 NEUROD4Q9HD90 331 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 XPNPEP1Q9NQW7 623 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 ARL8BQ9NVJ2 186 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 INSL6Q9Y581 213 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 B3GALT2O43825 422 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 EFNA1P20827 205 aaPredicted RBP17.09■□□□□ 0.33
SHANK1-201ENST00000293441 DHPSP49366 369 aaPredicted RBP17.09■□□□□ 0.33
SHANK1-201ENST00000293441 BLKP51451 505 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 PLA2G16P53816 162 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 RPS24P62847 133 aaKnown RBP17.09■□□□□ 0.33
SHANK1-201ENST00000293441 FOLH1Q04609 750 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 KLF10Q13118 480 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 ANKRD46Q86W74 232 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 ZHX1-C8orf76Q96EF9 292 aa17.09■□□□□ 0.33
SHANK1-201ENST00000293441 NARS2Q96I59 477 aaKnown RBP17.09■□□□□ 0.33
SHANK1-201ENST00000293441 ADH5P11766 374 aa17.08■□□□□ 0.33
SHANK1-201ENST00000293441 RYKP34925 604 aa17.08■□□□□ 0.33
SHANK1-201ENST00000293441 NSG1P42857 185 aa17.08■□□□□ 0.33
SHANK1-201ENST00000293441 MMAAQ8IVH4 418 aaKnown RBP17.08■□□□□ 0.33
SHANK1-201ENST00000293441 PHC3Q8NDX5 983 aa17.08■□□□□ 0.33
SHANK1-201ENST00000293441 GSTCDQ8NEC7 633 aa17.08■□□□□ 0.33
SHANK1-201ENST00000293441 TRPV3Q8NET8 790 aa17.08■□□□□ 0.33
SHANK1-201ENST00000293441 ABI3Q9P2A4 366 aa17.08■□□□□ 0.33
SHANK1-201ENST00000293441 B4DGG1 531 aa17.08■□□□□ 0.33
SHANK1-201ENST00000293441 SSNA1O43805 119 aa17.08■□□□□ 0.33
SHANK1-201ENST00000293441 VNN1O95497 513 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms