RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 C19orf60Q96EN9 201 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 ALG14Q96F25 216 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 SLC46A2Q9BY10 475 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 BPIFA1Q9NP55 256 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 ACTR3BQ9P1U1 418 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 CDC14AQ9UNH5 594 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 MYOFQ9NZM1 2061 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 GFRA2O00451 464 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 SMAD6O43541 496 aaKnown RBP18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 FCGR1AP12314 374 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 CDKN1CP49918 316 aaPredicted RBP18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 ZNF549Q6P9A3 640 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 GLT6D1Q7Z4J2 308 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 SPRED1Q7Z699 444 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 SNX31Q8N9S9 440 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 HJURPQ8NCD3 748 aaPredicted RBP18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 FAM110BQ8TC76 370 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 TCEAL4Q96EI5 215 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 UBXN10Q96LJ8 280 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 DCUN1D5Q9BTE7 237 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 LHX3Q9UBR4 397 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 A0A0J9YYE9 177 aa18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 UBFD1O14562 309 aaKnown RBP18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 GIPC1O14908 333 aa18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 CD3EAPO15446 510 aaKnown RBP18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 RASAL1O95294 804 aa18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 GLP2RO95838 553 aa18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 GKP32189 559 aa18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 CCT8P50990 548 aa18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 PLK1P53350 603 aa18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 ACVR1Q04771 509 aa18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 ZNF829Q3KNS6 432 aaPredicted RBP18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 TMTC4Q5T4D3 741 aa18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 RPS27LQ71UM5 84 aaKnown RBP18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 PHF21BQ96EK2 531 aa18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 THAP11Q96EK4 314 aa18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 CDKN2AIPNLQ96HQ2 116 aa18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 RPF2Q9H7B2 306 aaKnown RBP18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 MAP10Q9P2G4 905 aa18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 GMPR2Q9P2T1 348 aaKnown RBP18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 RNF103-CHMP3A0A140T963 221 aa18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 H3BMQ9 156 aa18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 GPR39O43194 453 aa18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 RPP40O75818 363 aaKnown RBP18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 PRAMEF12O95522 483 aa18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 ALDOCP09972 364 aaKnown RBP18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 EN2P19622 333 aaPredicted RBP18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 CLEC6AQ6EIG7 209 aa18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 ABRAXAS1Q6UWZ7 409 aa18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 SPPL2CQ8IUH8 684 aa18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 CLP1Q92989 425 aaKnown RBP18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 COG8Q96MW5 612 aa18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 VWA7Q9Y334 891 aa18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 SH3BP1Q9Y3L3 701 aa18.1■□□□□ 0.49
PDLIM3-201ENST00000284767 TRIM64BA6NI03 449 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 ATE1O95260 518 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 GPIP06744 558 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 ADH1AP07327 375 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 SYN1P17600 705 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 RHOAP61586 193 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 KIF19Q2TAC6 998 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 ZNF678Q5SXM1 525 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 SLC15A3Q8IY34 581 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 CLYBLQ8N0X4 340 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 ZBTB8BQ8NAP8 495 aaPredicted RBP18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 GIPC3Q8TF64 312 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 YTHDF1Q9BYJ9 559 aaKnown RBP18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 RETREG1Q9H6L5 497 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 FBRSL1Q9HCM7 1045 aaKnown RBP18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 INSL6Q9Y581 213 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 UNC80Q8N2C7 3258 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 DENND4CQ5VZ89 1909 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 NR5A2O00482 541 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 ATP6V1G1O75348 118 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 CTNNB1P35222 781 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 SLC26A3P40879 764 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 ZNF140P52738 457 aaPredicted RBP18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 NFKB2Q00653 900 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 FOXM1Q08050 763 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 GPR158Q5T848 1215 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 GALNT7Q86SF2 657 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 OR4L1Q8NH43 312 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 ASB2Q96Q27 587 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 TMEM106CQ9BVX2 250 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 MUC13Q9H3R2 512 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 GID8Q9NWU2 228 aa18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 TDRKHQ9Y2W6 561 aaKnown RBP18.09■□□□□ 0.49
PDLIM3-201ENST00000284767 ATP6AP2A0A1C7CYW4 349 aa18.08■□□□□ 0.49
PDLIM3-201ENST00000284767 TYW5A2RUC4 315 aaKnown RBP18.08■□□□□ 0.49
PDLIM3-201ENST00000284767 ANKRD66B4E2M5 251 aa18.08■□□□□ 0.49
PDLIM3-201ENST00000284767 ANGPT2O15123 496 aa18.08■□□□□ 0.49
PDLIM3-201ENST00000284767 CLOCKO15516 846 aa18.08■□□□□ 0.49
PDLIM3-201ENST00000284767 ATP6AP2O75787 350 aa18.08■□□□□ 0.49
PDLIM3-201ENST00000284767 SUPT7LO94864 414 aa18.08■□□□□ 0.49
PDLIM3-201ENST00000284767 ARHGEF15O94989 841 aa18.08■□□□□ 0.49
PDLIM3-201ENST00000284767 ZNF12P17014 697 aa18.08■□□□□ 0.49
PDLIM3-201ENST00000284767 CD70P32970 193 aa18.08■□□□□ 0.49
PDLIM3-201ENST00000284767 PMS2P3Q13401 168 aa18.08■□□□□ 0.49
PDLIM3-201ENST00000284767 SPIDRQ14159 915 aa18.08■□□□□ 0.49
PDLIM3-201ENST00000284767 UGT3A2Q3SY77 523 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms