RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 CCDC85BQ15834 202 aaPredicted RBP14.32□□□□□ -0.12
TRIM23-202ENST00000274327 SPRED3Q2MJR0 410 aa14.32□□□□□ -0.12
TRIM23-202ENST00000274327 TTLL9Q3SXZ7 439 aa14.32□□□□□ -0.12
TRIM23-202ENST00000274327 ACSBG2Q5FVE4 666 aa14.32□□□□□ -0.12
TRIM23-202ENST00000274327 KIAA1211LQ6NV74 962 aa14.32□□□□□ -0.12
TRIM23-202ENST00000274327 CYHR1Q6ZMK1 362 aa14.32□□□□□ -0.12
TRIM23-202ENST00000274327 FRMD7Q6ZUT3 714 aa14.32□□□□□ -0.12
TRIM23-202ENST00000274327 PELI3Q8N2H9 469 aa14.32□□□□□ -0.12
TRIM23-202ENST00000274327 EXT2Q93063 718 aa14.32□□□□□ -0.12
TRIM23-202ENST00000274327 SKA1Q96BD8 255 aa14.32□□□□□ -0.12
TRIM23-202ENST00000274327 WWP1Q9H0M0 922 aa14.32□□□□□ -0.12
TRIM23-202ENST00000274327 FBRSQ9HAH7 460 aa14.32□□□□□ -0.12
TRIM23-202ENST00000274327 CD248Q9HCU0 757 aa14.32□□□□□ -0.12
TRIM23-202ENST00000274327 DNAJC28Q9NX36 388 aa14.32□□□□□ -0.12
TRIM23-202ENST00000274327 CNOT6Q9ULM6 557 aaKnown RBP14.32□□□□□ -0.12
TRIM23-202ENST00000274327 SUPT3HB4E1H0 165 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 NEMP1O14524 444 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 LZTS3O60299 673 aaPredicted RBP14.31□□□□□ -0.12
TRIM23-202ENST00000274327 SUPT3HO75486 399 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 CBSLP0DN79 551 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 C7P10643 843 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 GLULP15104 373 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 MSH3P20585 1137 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 AOAHP28039 575 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 CCR7P32248 378 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 CBSP35520 551 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 HERVK_113P63132 956 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 MRPS21P82921 87 aaKnown RBP14.31□□□□□ -0.12
TRIM23-202ENST00000274327 GRSF1Q12849 480 aaKnown RBP eCLIP14.31□□□□□ -0.12
TRIM23-202ENST00000274327 CFAP157Q5JU67 520 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 IER5LQ5T953 404 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 ERVK-6Q9BXR3 956 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 MYLK2Q9H1R3 596 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 CXorf56Q9H5V9 222 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 HEY2Q9UBP5 337 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 ZDHHC2Q9UIJ5 367 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 ANKRD12Q6UB98 2062 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 A0A1W2PQF6 199 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 SHISA7A6NL88 538 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 STX16-NPEPL1H3BU86 382 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 QSOX1O00391 747 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 STX16O14662 325 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 TSPAN6O43657 245 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 MTX2O75431 263 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 UBOX5O94941 541 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 KLF8O95600 359 aaPredicted RBP14.31□□□□□ -0.12
TRIM23-202ENST00000274327 COL9A1P20849 921 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 RPL14P50914 215 aaKnown RBP14.31□□□□□ -0.12
TRIM23-202ENST00000274327 STARD3Q14849 445 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 SETDB1Q15047 1291 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 SMAD2Q15796 467 aaKnown RBP14.31□□□□□ -0.12
TRIM23-202ENST00000274327 SPDYAQ5MJ70 313 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 SDE2Q6IQ49 451 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 SBSNQ6UWP8 590 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 DET1Q7L5Y6 550 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 TRMT11Q7Z4G4 463 aaKnown RBP14.31□□□□□ -0.12
TRIM23-202ENST00000274327 RAB44Q7Z6P3 723 aaPredicted RBP14.31□□□□□ -0.12
TRIM23-202ENST00000274327 ADAMTSL2Q86TH1 951 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 GPSM1Q86YR5 675 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 MYO1HQ8N1T3 1032 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 FBXO39Q8N4B4 442 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 HDDC3Q8N4P3 179 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 MSANTD3Q96H12 275 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 ANKRD27Q96NW4 1050 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 LRRC37BQ96QE4 947 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 EBF4Q9BQW3 602 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 TRMOQ9BU70 441 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 C1QTNF3Q9BXJ4 246 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 NUDT4Q9NZJ9 180 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 SERGEFQ9UGK8 458 aa14.31□□□□□ -0.12
TRIM23-202ENST00000274327 A0A1W2PP55 124 aa14.3□□□□□ -0.12
TRIM23-202ENST00000274327 MATN2O00339 956 aa14.3□□□□□ -0.12
TRIM23-202ENST00000274327 ASGR2P07307 311 aa14.3□□□□□ -0.12
TRIM23-202ENST00000274327 GFAPP14136 432 aa14.3□□□□□ -0.12
TRIM23-202ENST00000274327 HOXB2P14652 356 aa14.3□□□□□ -0.12
TRIM23-202ENST00000274327 SERPINB3P29508 390 aa14.3□□□□□ -0.12
TRIM23-202ENST00000274327 ELF3P78545 371 aaPredicted RBP14.3□□□□□ -0.12
TRIM23-202ENST00000274327 TUBB3Q13509 450 aa14.3□□□□□ -0.12
TRIM23-202ENST00000274327 PPP1R3AQ16821 1122 aa14.3□□□□□ -0.12
TRIM23-202ENST00000274327 PFKFB4Q16877 469 aa14.3□□□□□ -0.12
TRIM23-202ENST00000274327 PLEKHS1Q5SXH7 462 aa14.3□□□□□ -0.12
TRIM23-202ENST00000274327 ZNF648Q5T619 568 aaPredicted RBP14.3□□□□□ -0.12
TRIM23-202ENST00000274327 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.3□□□□□ -0.12
TRIM23-202ENST00000274327 MTDHQ86UE4 582 aaKnown RBP14.3□□□□□ -0.12
TRIM23-202ENST00000274327 PHYKPLQ8IUZ5 450 aa14.3□□□□□ -0.12
TRIM23-202ENST00000274327 STON2Q8WXE9 905 aa14.3□□□□□ -0.12
TRIM23-202ENST00000274327 ERP27Q96DN0 273 aa14.3□□□□□ -0.12
TRIM23-202ENST00000274327 MKRN2Q9H000 416 aaKnown RBP14.3□□□□□ -0.12
TRIM23-202ENST00000274327 TRPM6Q9BX84 2022 aa14.3□□□□□ -0.12
TRIM23-202ENST00000274327 SLCO1B7G3V0H7 640 aa14.29□□□□□ -0.12
TRIM23-202ENST00000274327 K7ESM1 405 aa14.29□□□□□ -0.12
TRIM23-202ENST00000274327 GRID2O43424 1007 aa14.29□□□□□ -0.12
TRIM23-202ENST00000274327 NARSO43776 548 aaKnown RBP14.29□□□□□ -0.12
TRIM23-202ENST00000274327 NUAK1O60285 661 aa14.29□□□□□ -0.12
TRIM23-202ENST00000274327 RPS17P08708 135 aaKnown RBP14.29□□□□□ -0.12
TRIM23-202ENST00000274327 ENO3P13929 434 aaPredicted RBP14.29□□□□□ -0.12
TRIM23-202ENST00000274327 IDH3AP50213 366 aa14.29□□□□□ -0.12
TRIM23-202ENST00000274327 ALDH18A1P54886 795 aaKnown RBP14.29□□□□□ -0.12
TRIM23-202ENST00000274327 TMEM115Q12893 351 aaPredicted RBP14.29□□□□□ -0.12
TRIM23-202ENST00000274327 BNIP1Q12981 228 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms