RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 C18orf21Q32NC0 220 aaPredicted RBP27.17■■□□□ 1.94
CBX4-201ENST00000269397 FAM98BQ52LJ0 330 aaKnown RBP27.17■■□□□ 1.94
CBX4-201ENST00000269397 PERM1Q5SV97 790 aa27.17■■□□□ 1.94
CBX4-201ENST00000269397 BRSK1Q8TDC3 778 aa27.17■■□□□ 1.94
CBX4-201ENST00000269397 CCDC138Q96M89 665 aa27.17■■□□□ 1.94
CBX4-201ENST00000269397 GPN2Q9H9Y4 310 aaPredicted RBP27.17■■□□□ 1.94
CBX4-201ENST00000269397 HPS4Q9NQG7 708 aa27.17■■□□□ 1.94
CBX4-201ENST00000269397 TMEM248Q9NWD8 314 aa27.17■■□□□ 1.94
CBX4-201ENST00000269397 FAM118AQ9NWS6 357 aa27.17■■□□□ 1.94
CBX4-201ENST00000269397 DOCK4Q8N1I0 1966 aa27.17■■□□□ 1.94
CBX4-201ENST00000269397 LCHNA4D1U4 455 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 BCAS1O75363 584 aaPredicted RBP27.16■■□□□ 1.94
CBX4-201ENST00000269397 PRKACGP22612 351 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 HTR1BP28222 390 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 RAB15P59190 212 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 GSTM4Q03013 218 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 PTPRNQ16849 979 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 DPY19L1Q2PZI1 675 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 NIPAL1Q6NVV3 410 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 GPRIN3Q6ZVF9 776 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 RBM23Q86U06 439 aaKnown RBP27.16■■□□□ 1.94
CBX4-201ENST00000269397 FAM126BQ8IXS8 530 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 TADA1Q96BN2 335 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 MYEOVQ96EZ4 313 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 C1orf74Q96LT6 269 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 POPDC3Q9HBV1 291 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 SPO11Q9Y5K1 396 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 DOCK3Q8IZD9 2030 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 OR1I1O60431 355 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 NIPSNAP2O75323 286 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 ANXA6P08133 673 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 RPL9P32969 192 aaKnown RBP27.16■■□□□ 1.94
CBX4-201ENST00000269397 RAD23AP54725 363 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 TSPY1Q01534 308 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 TRIM16LQ309B1 348 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 ABI1Q8IZP0 508 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 CHDHQ8NE62 594 aaPredicted RBP27.16■■□□□ 1.94
CBX4-201ENST00000269397 OR4K2Q8NGD2 314 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 C17orf80Q9BSJ5 609 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 CCDC90BQ9GZT6 254 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 CD274Q9NZQ7 290 aa27.16■■□□□ 1.94
CBX4-201ENST00000269397 TRIM43BA6NCK2 446 aa27.15■■□□□ 1.94
CBX4-201ENST00000269397 RAMP2O60895 175 aa27.15■■□□□ 1.94
CBX4-201ENST00000269397 SOAT2O75908 522 aa27.15■■□□□ 1.94
CBX4-201ENST00000269397 GSTM2P28161 218 aa27.15■■□□□ 1.94
CBX4-201ENST00000269397 ERVPABLB-1P60509 514 aa27.15■■□□□ 1.94
CBX4-201ENST00000269397 CBX2Q14781 532 aaPredicted RBP27.15■■□□□ 1.94
CBX4-201ENST00000269397 SULT1C3Q6IMI6 304 aa27.15■■□□□ 1.94
CBX4-201ENST00000269397 CGREF1Q99674 301 aa27.15■■□□□ 1.94
CBX4-201ENST00000269397 POLR1EQ9GZS1 481 aaKnown RBP27.15■■□□□ 1.94
CBX4-201ENST00000269397 ACTL8Q9H568 366 aa27.15■■□□□ 1.94
CBX4-201ENST00000269397 SARS2Q9NP81 518 aaKnown RBP27.15■■□□□ 1.94
CBX4-201ENST00000269397 ZIM2Q9NZV7 527 aa27.15■■□□□ 1.94
CBX4-201ENST00000269397 TLR6Q9Y2C9 796 aa27.15■■□□□ 1.94
CBX4-201ENST00000269397 NDUFS3O75489 264 aa27.15■■□□□ 1.94
CBX4-201ENST00000269397 INMTO95050 263 aa27.15■■□□□ 1.94
CBX4-201ENST00000269397 GRIK2Q13002 908 aa27.15■■□□□ 1.94
CBX4-201ENST00000269397 ZNF235Q14590 738 aa27.15■■□□□ 1.94
CBX4-201ENST00000269397 SKIV2LQ15477 1246 aaKnown RBP27.15■■□□□ 1.94
CBX4-201ENST00000269397 SLC39A12Q504Y0 691 aa27.15■■□□□ 1.94
CBX4-201ENST00000269397 C6orf141Q5SZD1 244 aa27.15■■□□□ 1.94
CBX4-201ENST00000269397 LETMD1Q6P1Q0 360 aa27.15■■□□□ 1.94
CBX4-201ENST00000269397 EEF1AKMT1Q8WVE0 214 aa27.15■■□□□ 1.94
CBX4-201ENST00000269397 MBOAT4Q96T53 435 aa27.15■■□□□ 1.94
CBX4-201ENST00000269397 NUSAP1Q9BXS6 441 aaKnown RBP27.15■■□□□ 1.94
CBX4-201ENST00000269397 ZNF408Q9H9D4 720 aa27.15■■□□□ 1.94
CBX4-201ENST00000269397 FLRT1Q9NZU1 646 aa27.15■■□□□ 1.94
CBX4-201ENST00000269397 PDE10AQ9Y233 779 aa27.15■■□□□ 1.94
CBX4-201ENST00000269397 A0A0U1RQS6 177 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 DFNA5O60443 496 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 FGF1P05230 155 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 HALP42357 657 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 FXNQ16595 210 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 IL27RAQ6UWB1 636 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 DNAJC14Q6Y2X3 702 aaPredicted RBP27.14■■□□□ 1.94
CBX4-201ENST00000269397 PLEKHH3Q7Z736 793 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 FKBP10Q96AY3 582 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 SLC39A13Q96H72 371 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 RPRD1AQ96P16 312 aaPredicted RBP27.14■■□□□ 1.94
CBX4-201ENST00000269397 LIMD1Q9UGP4 676 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 DAPK2Q9UIK4 370 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 BAG5Q9UL15 447 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 SYCE1LA8MT33 242 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 KATNA1O75449 491 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 CST1P01037 141 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 OGNP20774 298 aaKnown RBP27.14■■□□□ 1.94
CBX4-201ENST00000269397 CD47Q08722 323 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 TUBA3CQ13748 450 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 SPESP1Q6UW49 350 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 SLC16A12Q6ZSM3 486 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 OR56A4Q8NGH8 313 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 EXOC2Q96KP1 924 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 TBCDQ9BTW9 1192 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 PALMDQ9NP74 551 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 VAPAQ9P0L0 249 aa27.14■■□□□ 1.94
CBX4-201ENST00000269397 CCL15-CCL14A0A0B4J2E2 113 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 TULP3O75386 442 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 PRSS23O95084 383 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 HOXB8P17481 243 aaPredicted RBP27.13■■□□□ 1.93
CBX4-201ENST00000269397 OR1E1P30953 314 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms