RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 ASB2Q96Q27 587 aa11.4□□□□□ -0.58
SCAF11-201ENST00000266589 TTYH1Q9H313 450 aaPredicted RBP11.4□□□□□ -0.58
SCAF11-201ENST00000266589 LATS2Q9NRM7 1088 aa11.4□□□□□ -0.58
SCAF11-201ENST00000266589 NUDT4Q9NZJ9 180 aa11.4□□□□□ -0.58
SCAF11-201ENST00000266589 LNPEPQ9UIQ6 1025 aa11.4□□□□□ -0.58
SCAF11-201ENST00000266589 TMCO1Q9UM00 188 aa11.4□□□□□ -0.58
SCAF11-201ENST00000266589 TRPC5OSA6NMA1 111 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 HNRNPCL1O60812 293 aaKnown RBP11.39□□□□□ -0.59
SCAF11-201ENST00000266589 ESRRAP11474 423 aaPredicted RBP11.39□□□□□ -0.59
SCAF11-201ENST00000266589 NQO1P15559 274 aaKnown RBP11.39□□□□□ -0.59
SCAF11-201ENST00000266589 MSH3P20585 1137 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 IGFBP4P22692 258 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 CCR7P32248 378 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 AGTR2P50052 363 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 SEC13P55735 322 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 ADGRE1Q14246 886 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 CRY1Q16526 586 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 KHDC1Q4VXA5 237 aaKnown RBP11.39□□□□□ -0.59
SCAF11-201ENST00000266589 ZNF648Q5T619 568 aaPredicted RBP11.39□□□□□ -0.59
SCAF11-201ENST00000266589 ANKS6Q68DC2 871 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 CACUL1Q86Y37 369 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 KIRREL3Q8IZU9 778 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 TRPC4APQ8TEL6 797 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 BTN2A2Q8WVV5 523 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 VPS35Q96QK1 796 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 P2RY13Q9BPV8 354 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 FAM126AQ9BYI3 521 aaPredicted RBP11.39□□□□□ -0.59
SCAF11-201ENST00000266589 MID1IP1Q9NPA3 183 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 ARHGEF3Q9NR81 526 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 ADAMTS6Q9UKP5 1117 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 ANKRD12Q6UB98 2062 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 ANHXE9PGG2 379 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 PPP6CO00743 305 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 RAD51BO15315 384 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 CDK14O94921 469 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 S100BP04271 92 aaPredicted RBP11.39□□□□□ -0.59
SCAF11-201ENST00000266589 C6P13671 934 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 AOC1P19801 751 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 P2RY2P41231 377 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 SH3BP2P78314 561 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 CLCQ05315 142 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 BTKQ06187 659 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 ENPP2Q13822 863 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 CKAP5Q14008 2032 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 COL19A1Q14993 1142 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 PPP1R3AQ16821 1122 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 LSM12Q3MHD2 195 aaKnown RBP11.39□□□□□ -0.59
SCAF11-201ENST00000266589 METTL21CQ5VZV1 264 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 CLEC6AQ6EIG7 209 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 CYP2U1Q7Z449 544 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 STON2Q8WXE9 905 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 GLYATL1Q969I3 302 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 NUS1Q96E22 293 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 C1QTNF3Q9BXJ4 246 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 HDAC8Q9BY41 377 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 PRO3102Q9H379 93 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 SLC40A1Q9NP59 571 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 SEMA4BQ9NPR2 832 aaPredicted RBP11.39□□□□□ -0.59
SCAF11-201ENST00000266589 KLHL42Q9P2K6 505 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 TRAF6Q9Y4K3 522 aa11.39□□□□□ -0.59
SCAF11-201ENST00000266589 INPP4BO15327 924 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 FFAR2O15552 330 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 MMP20O60882 483 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 RECQL5O94762 991 aaPredicted RBP11.38□□□□□ -0.59
SCAF11-201ENST00000266589 CBSLP0DN79 551 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 AOAHP28039 575 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 PTPN4P29074 926 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 CBSP35520 551 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 TIE1P35590 1138 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 CPA2P48052 419 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 CNTN1Q12860 1018 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 LCP2Q13094 533 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 BOP1Q14137 746 aaKnown RBP11.38□□□□□ -0.59
SCAF11-201ENST00000266589 AAK1Q2M2I8 961 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 TMEM52BQ4KMG9 183 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 LDLRAP1Q5SW96 308 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 FAM46CQ5VWP2 391 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 FAM219BQ5XKK7 198 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 NXNQ6DKJ4 435 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 CYHR1Q6ZMK1 362 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 SUGP1Q8IWZ8 645 aaKnown RBP11.38□□□□□ -0.59
SCAF11-201ENST00000266589 RAVER1Q8IY67 606 aaKnown RBP11.38□□□□□ -0.59
SCAF11-201ENST00000266589 ZNF483Q8TF39 744 aaPredicted RBP11.38□□□□□ -0.59
SCAF11-201ENST00000266589 EZH1Q92800 747 aaPredicted RBP11.38□□□□□ -0.59
SCAF11-201ENST00000266589 ESAMQ96AP7 390 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 CCDC28BQ9BUN5 200 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 EIF2B4Q9UI10 523 aaKnown RBP11.38□□□□□ -0.59
SCAF11-201ENST00000266589 TAGLN3Q9UI15 199 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 CD207Q9UJ71 328 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 PCTPQ9UKL6 214 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 OARD1Q9Y530 152 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 ASB1Q9Y576 335 aa11.38□□□□□ -0.59
SCAF11-201ENST00000266589 OR2AG2A6NM03 316 aa11.37□□□□□ -0.59
SCAF11-201ENST00000266589 H3BQ06 376 aaPredicted RBP11.37□□□□□ -0.59
SCAF11-201ENST00000266589 K7EQS6 105 aa11.37□□□□□ -0.59
SCAF11-201ENST00000266589 SDHDO14521 159 aa11.37□□□□□ -0.59
SCAF11-201ENST00000266589 DCXO43602 365 aa11.37□□□□□ -0.59
SCAF11-201ENST00000266589 SGTAO43765 313 aa11.37□□□□□ -0.59
SCAF11-201ENST00000266589 LZTS3O60299 673 aaPredicted RBP11.37□□□□□ -0.59
SCAF11-201ENST00000266589 AP2A2O94973 939 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms