RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 ADAMTSL3P82987 1691 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 UBE2QL1A1L167 161 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 NEMP2A6NFY4 417 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 CXorf49A8MYA2 514 aaPredicted RBP10.64□□□□□ -0.71
CD44-201ENST00000263398 ZW10O43264 779 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 GLUD1P00367 558 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 PRKAR1AP10644 381 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 CTNNB1P35222 781 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 HOXD13P35453 343 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 HCAR3P49019 387 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 TAS2R41P59536 307 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 GPX6P59796 221 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 SLC18A2Q05940 514 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 VARS2Q5ST30 1063 aaKnown RBP10.64□□□□□ -0.71
CD44-201ENST00000263398 SYPL2Q5VXT5 272 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 NCBP2-AS2Q69YL0 99 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 TMEM214Q6NUQ4 689 aaKnown RBP10.64□□□□□ -0.71
CD44-201ENST00000263398 CLEC20AQ6ZU45 233 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 KRT77Q7Z794 578 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 CHPFQ8IZ52 775 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 GLIS1Q8NBF1 620 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 AHCYL2Q96HN2 611 aaKnown RBP10.64□□□□□ -0.71
CD44-201ENST00000263398 MCMBPQ9BTE3 642 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 TPK1Q9H3S4 243 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.64□□□□□ -0.71
CD44-201ENST00000263398 WBP11Q9Y2W2 641 aaKnown RBP10.64□□□□□ -0.71
CD44-201ENST00000263398 PARP4Q9UKK3 1724 aaKnown RBP10.64□□□□□ -0.71
CD44-201ENST00000263398 FADS2P1A8MWK0 482 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 NEDD8-MDP1E9PL57 170 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 KERAO60938 352 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 CXCL14O95715 111 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 SELPP16109 830 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 IMPDH1P20839 514 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 ZNF280AP59817 542 aaPredicted RBP10.64□□□□□ -0.71
CD44-201ENST00000263398 NOGQ13253 232 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 TAF1AQ15573 450 aaPredicted RBP10.64□□□□□ -0.71
CD44-201ENST00000263398 GCNT6Q5T4J0 391 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 EGFLAMQ63HQ2 1017 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 TMEM198Q66K66 360 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 P2RY8Q86VZ1 359 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 SRFBP1Q8NEF9 429 aaKnown RBP10.64□□□□□ -0.71
CD44-201ENST00000263398 FERD3LQ96RJ6 166 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 KLHL31Q9H511 634 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 CD320Q9NPF0 282 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 CNOT6Q9ULM6 557 aaKnown RBP10.64□□□□□ -0.71
CD44-201ENST00000263398 NR2E3Q9Y5X4 410 aa10.64□□□□□ -0.71
CD44-201ENST00000263398 ZFP37Q9Y6Q3 630 aaPredicted RBP10.64□□□□□ -0.71
CD44-201ENST00000263398 SAGE2PA6NJ88 616 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 H0YGN5 161 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 ADH1CP00326 375 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 CCR3P51677 355 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 DLG1Q12959 904 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 ZNF697Q5TEC3 545 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 CES5AQ6NT32 575 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 AGMOQ6ZNB7 445 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 AHSA2Q719I0 299 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 ZC3H3Q8IXZ2 948 aaKnown RBP10.63□□□□□ -0.71
CD44-201ENST00000263398 PLEKHO2Q8TD55 490 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 ADAMTS15Q8TE58 950 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 NFS1Q9Y697 457 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 PTPRJQ12913 1337 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 CHURC1-FNTBB4DL54 471 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 CASKO14936 926 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 STBD1O95210 358 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 FAM163BP0C2L3 166 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 CCNHP51946 323 aaPredicted RBP10.63□□□□□ -0.71
CD44-201ENST00000263398 RPS14P62263 151 aaKnown RBP10.63□□□□□ -0.71
CD44-201ENST00000263398 ERVK-8P63133 956 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 SLC25A11Q02978 314 aaKnown RBP10.63□□□□□ -0.71
CD44-201ENST00000263398 FAM174BQ3ZCQ3 159 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.63□□□□□ -0.71
CD44-201ENST00000263398 ESAMQ96AP7 390 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 AP2M1Q96CW1 435 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 NSMCE3Q96MG7 304 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 S100A13Q99584 98 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 OSBPL2Q9H1P3 480 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 FAM234BA2RU67 622 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 IQCF5A8MTL0 148 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 CLDN25C9JDP6 229 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 CACNB4O00305 520 aaPredicted RBP10.63□□□□□ -0.71
CD44-201ENST00000263398 RAP2AP10114 183 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 NCK1P16333 377 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 LAG3P18627 525 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 NSG1P42857 185 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 PNLIPRP1P54315 467 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 BNC1Q01954 994 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 OGDHQ02218 1023 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 SRSF11Q05519 484 aaKnown RBP10.63□□□□□ -0.71
CD44-201ENST00000263398 TCEAL1Q15170 157 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 PITRM1Q5JRX3 1037 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 SLC39A4Q6P5W5 647 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 C6orf89Q6UWU4 347 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 SATL1Q86VE3 508 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 GALNT15Q8N3T1 639 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 LIX1Q8N485 282 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 DNAJB8Q8NHS0 232 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 DPF3Q92784 378 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 ASB9Q96DX5 294 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 TCF25Q9BQ70 676 aa10.63□□□□□ -0.71
CD44-201ENST00000263398 LRRC3Q9BY71 257 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms