RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 FNDC8Q8TC99 324 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 ZNF599Q96NL3 588 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 FAM193BQ96PV7 902 aaPredicted RBP9.02□□□□□ -0.97
MSH4-201ENST00000263187 MYOCQ99972 504 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 BOCQ9BWV1 1114 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 GPR62Q9BZJ7 368 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 TM6SF2Q9BZW4 377 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 TFB2MQ9H5Q4 396 aaKnown RBP9.02□□□□□ -0.97
MSH4-201ENST00000263187 IKZF5Q9H5V7 419 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 HACD3Q9P035 362 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 CORINQ9Y5Q5 1042 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 ZBBXA8MT70 800 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 AXIN1O15169 862 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 SH3BGRLO75368 114 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 FGF1P05230 155 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 AKR1A1P14550 325 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 CA5AP35218 305 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 GSSP48637 474 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 NUP107P57740 925 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 IL10RBQ08334 325 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 ITGADQ13349 1161 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 KCNA10Q16322 511 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 NKG7Q16617 165 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 ATXN7L2Q5T6C5 722 aaPredicted RBP9.01□□□□□ -0.97
MSH4-201ENST00000263187 INTS11Q5TA45 600 aaKnown RBP9.01□□□□□ -0.97
MSH4-201ENST00000263187 GALNT18Q6P9A2 607 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 SPESP1Q6UW49 350 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 GLB1LQ6UWU2 654 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 FAM151BQ6UXP7 276 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 HACD2Q6Y1H2 254 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 GCNT7Q6ZNI0 430 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 R3HCC1LQ7Z5L2 792 aaKnown RBP9.01□□□□□ -0.97
MSH4-201ENST00000263187 RTN4RL1Q86UN2 441 aaPredicted RBP9.01□□□□□ -0.97
MSH4-201ENST00000263187 SERINC5Q86VE9 423 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 CCDC117Q8IWD4 279 aaPredicted RBP9.01□□□□□ -0.97
MSH4-201ENST00000263187 C1orf74Q96LT6 269 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 BIRC8Q96P09 236 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 TSPAN18Q96SJ8 248 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 EGFL8Q99944 293 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 TRIM62Q9BVG3 475 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 HIPK3Q9H422 1215 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 SYTL2Q9HCH5 934 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 SCUBE2Q9NQ36 999 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 PRDM8Q9NQV8 689 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 VAPAQ9P0L0 249 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 LEF1Q9UJU2 399 aaPredicted RBP9.01□□□□□ -0.97
MSH4-201ENST00000263187 SCML2Q9UQR0 700 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 F5H5T6 163 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 STX7O15400 261 aaKnown RBP9.01□□□□□ -0.97
MSH4-201ENST00000263187 PRAMEF11O60813 436 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 DIRAS1O95057 198 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 ESRRBO95718 433 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 NDST3O95803 873 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 MYCP01106 439 aaPredicted RBP9.01□□□□□ -0.97
MSH4-201ENST00000263187 EFNA1P20827 205 aaPredicted RBP9.01□□□□□ -0.97
MSH4-201ENST00000263187 PIGAP37287 484 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 IL2P60568 153 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 TUBA4AP68366 448 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 FPGSQ05932 587 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 CD300CQ08708 224 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 TGFBIQ15582 683 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 CLLU1OSQ5K130 101 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 CTSL3PQ5NE16 218 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 PRMT9Q6P2P2 845 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 RNF19BQ6ZMZ0 732 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 BTLAQ7Z6A9 289 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 PATL1Q86TB9 770 aaKnown RBP9.01□□□□□ -0.97
MSH4-201ENST00000263187 C2orf69Q8N8R5 385 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 MFSD2AQ8NA29 543 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 TNIP2Q8NFZ5 429 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 OR4F6Q8NGB9 312 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 FRS2Q8WU20 508 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 SDCCAG3Q96C92 435 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 TOR3AQ9H497 397 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 NTN4Q9HB63 628 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 TLR9Q9NR96 1032 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.01□□□□□ -0.97
MSH4-201ENST00000263187 PCDHB9Q9Y5E1 797 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 RAI2Q9Y5P3 530 aa9.01□□□□□ -0.97
MSH4-201ENST00000263187 C2orf81A6NN90 581 aa9□□□□□ -0.97
MSH4-201ENST00000263187 FAM155AB1AL88 458 aaPredicted RBP9□□□□□ -0.97
MSH4-201ENST00000263187 H0YJX3 145 aa9□□□□□ -0.97
MSH4-201ENST00000263187 VPS26AO75436 327 aa9□□□□□ -0.97
MSH4-201ENST00000263187 E2F6O75461 281 aa9□□□□□ -0.97
MSH4-201ENST00000263187 LRATO95237 230 aa9□□□□□ -0.97
MSH4-201ENST00000263187 PKMP14618 531 aaKnown RBP9□□□□□ -0.97
MSH4-201ENST00000263187 HLA-DPA1P20036 260 aa9□□□□□ -0.97
MSH4-201ENST00000263187 FUT4P22083 530 aa9□□□□□ -0.97
MSH4-201ENST00000263187 ATP4BP51164 291 aa9□□□□□ -0.97
MSH4-201ENST00000263187 MLLT10P55197 1068 aa9□□□□□ -0.97
MSH4-201ENST00000263187 C21orf59P57076 290 aa9□□□□□ -0.97
MSH4-201ENST00000263187 FKBP1BP68106 108 aa9□□□□□ -0.97
MSH4-201ENST00000263187 NFKB2Q00653 900 aa9□□□□□ -0.97
MSH4-201ENST00000263187 PRKG2Q13237 762 aa9□□□□□ -0.97
MSH4-201ENST00000263187 FAM174BQ3ZCQ3 159 aa9□□□□□ -0.97
MSH4-201ENST00000263187 CYP20A1Q6UW02 462 aa9□□□□□ -0.97
MSH4-201ENST00000263187 PRSS55Q6UWB4 352 aaPredicted RBP9□□□□□ -0.97
MSH4-201ENST00000263187 TRIM74Q86UV6 250 aa9□□□□□ -0.97
MSH4-201ENST00000263187 TRIM73Q86UV7 250 aa9□□□□□ -0.97
MSH4-201ENST00000263187 TANKQ92844 425 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms