RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 C9orf131Q5VYM1 1079 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 POTEHQ6S545 545 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 RAVER1Q8IY67 606 aaKnown RBP11.95□□□□□ -0.5
SMG6-201ENST00000263073 SUSD6Q92537 303 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 PSME2Q9UL46 239 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 CNTNAP1P78357 1384 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 NEURL4Q96JN8 1562 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 TMEM63AO94886 807 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 CLIC3O95833 236 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 CSTF1Q05048 431 aaKnown RBP11.94□□□□□ -0.5
SMG6-201ENST00000263073 SREBF2Q12772 1141 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 CRTC2Q53ET0 693 aaPredicted RBP11.94□□□□□ -0.5
SMG6-201ENST00000263073 PDE12Q6L8Q7 609 aaKnown RBP11.94□□□□□ -0.5
SMG6-201ENST00000263073 DEFB132Q7Z7B7 95 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 FAM129CQ86XR2 697 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 ZDHHC21Q8IVQ6 265 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 PCSK9Q8NBP7 692 aaKnown RBP11.94□□□□□ -0.5
SMG6-201ENST00000263073 GBA3Q9H227 469 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 ITM2CQ9NQX7 267 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 ADARB2Q9NS39 739 aaKnown RBP11.94□□□□□ -0.5
SMG6-201ENST00000263073 OAZ3Q9UMX2 235 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 GMEB1Q9Y692 573 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 OR6C70A6NIJ9 312 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 H3BNX3 289 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 CFHP08603 1231 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 ITPKBP27987 946 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 MNDAP41218 407 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 IST1P53990 364 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 OLR1P78380 273 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 SCN1BQ07699 218 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.94□□□□□ -0.5
SMG6-201ENST00000263073 CNTD1Q8N815 330 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 CHST4Q8NCG5 386 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 OR52B2Q96RD2 323 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 BRINP2Q9C0B6 783 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 MAGEE1Q9HCI5 957 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 TVP23BQ9NYZ1 205 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 EVLQ9UI08 416 aaPredicted RBP11.94□□□□□ -0.5
SMG6-201ENST00000263073 PCDHGC3Q9UN70 934 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 PCDHGC4Q9Y5F7 938 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 SQORQ9Y6N5 450 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 TLR5O60602 858 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 FESP07332 822 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 AMD1P17707 334 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 CYP2C18P33260 490 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 TXNL4AP83876 142 aaKnown RBP11.94□□□□□ -0.5
SMG6-201ENST00000263073 DEFA5Q01523 94 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 FAM174BQ3ZCQ3 159 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 GCNT6Q5T4J0 391 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 UBAP2Q5T6F2 1119 aaKnown RBP11.94□□□□□ -0.5
SMG6-201ENST00000263073 FRRS1Q6ZNA5 592 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 MOB2Q70IA6 237 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 RBFAQ8N0V3 343 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 PKP2Q99959 881 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 ARL5AQ9Y689 179 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 CSN2P05814 226 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 CTSEP14091 401 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 CD36P16671 472 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 TGFBR2P37173 567 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 LAPTM4AQ15012 233 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 SFT2D3Q587I9 215 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 XKR5Q6UX68 686 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 SLC22A16Q86VW1 577 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 ZNF615Q8N8J6 731 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 TNFAIP8L1Q8WVP5 186 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 MYO19Q96H55 970 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 COPS8Q99627 209 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 LMAN2LQ9H0V9 348 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 GIT1Q9Y2X7 761 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 SPEF1Q9Y4P9 236 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 KCNE2Q9Y6J6 123 aa11.94□□□□□ -0.5
SMG6-201ENST00000263073 E9PAM4 449 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 NKRFO15226 690 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMG6-201ENST00000263073 HCN1O60741 890 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 SSR2P43308 183 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 TUFMP49411 452 aaKnown RBP11.93□□□□□ -0.5
SMG6-201ENST00000263073 ELP6Q0PNE2 266 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 MERTKQ12866 999 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 LINGO2Q7L985 606 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 ZBTB2Q8N680 514 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 FRMD6Q96NE9 622 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 MNTQ99583 582 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 GBA2Q9HCG7 927 aaPredicted RBP11.93□□□□□ -0.5
SMG6-201ENST00000263073 GMIPQ9P107 970 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 PCDHGA10Q9Y5H3 936 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 FGF1P05230 155 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 ADRA1BP35368 520 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 PSEN1P49768 467 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 GMFBP60983 142 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 NAE1Q13564 534 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 SWI5Q1ZZU3 235 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 NOMO2Q5JPE7 1267 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 MAB21L3Q8N8X9 362 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 CANT1Q8WVQ1 401 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 TEFMQ96QE5 360 aaKnown RBP11.93□□□□□ -0.5
SMG6-201ENST00000263073 C1QTNF1Q9BXJ1 281 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 EHD1Q9H4M9 534 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 ST3GAL5Q9UNP4 418 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 FADS2P1A8MWK0 482 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 AP2A1O95782 977 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms