RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 HECTD2Q5U5R9 776 aa27.12■■□□□ 1.93
SMARCD3-201ENST00000262188 LYPLAL1Q5VWZ2 237 aa27.12■■□□□ 1.93
SMARCD3-201ENST00000262188 CEP97Q8IW35 865 aa27.12■■□□□ 1.93
SMARCD3-201ENST00000262188 TTC1Q99614 292 aa27.12■■□□□ 1.93
SMARCD3-201ENST00000262188 GPR22Q99680 433 aa27.12■■□□□ 1.93
SMARCD3-201ENST00000262188 THADAQ6YHU6 1953 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 GMNCA6NCL1 334 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 TMEM202A6NGA9 273 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 SGTAO43765 313 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 ALDOAP04075 364 aaKnown RBP27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 LINGO3P0C6S8 592 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 KRT15P19012 456 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 TAS2R39P59534 338 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 LDLRAP1Q5SW96 308 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 SLC36A4Q6YBV0 504 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 GALNT7Q86SF2 657 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 CADM4Q8NFZ8 388 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 FOXJ1Q92949 421 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 DCUN1D1Q96GG9 259 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 AARSD1Q9BTE6 412 aaKnown RBP27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 YIPF3Q9GZM5 350 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 FBXO4Q9UKT5 387 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 MYO15AQ9UKN7 3530 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 TPP1O14773 563 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 PHGDHO43175 533 aaKnown RBP27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 DNAJC6O75061 913 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 KRT38O76015 456 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 VIMP08670 466 aaKnown RBP27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 SNRPAP09012 282 aaKnown RBP27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 CREB1P16220 341 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 CUL3Q13618 768 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 OR13H1Q8NG92 308 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 SLC30A3Q99726 388 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 MRPL40Q9NQ50 206 aaKnown RBP27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 FAM8A1Q9UBU6 413 aa27.11■■□□□ 1.93
SMARCD3-201ENST00000262188 PIKFYVEQ9Y2I7 2098 aa27.1■■□□□ 1.93
SMARCD3-201ENST00000262188 PRAMEF26H0Y7S4 382 aa27.1■■□□□ 1.93
SMARCD3-201ENST00000262188 FUCA1P04066 466 aa27.1■■□□□ 1.93
SMARCD3-201ENST00000262188 PYGLP06737 847 aa27.1■■□□□ 1.93
SMARCD3-201ENST00000262188 SP9P0CG40 484 aa27.1■■□□□ 1.93
SMARCD3-201ENST00000262188 ATP1B2P14415 290 aaPredicted RBP27.1■■□□□ 1.93
SMARCD3-201ENST00000262188 PKMP14618 531 aaKnown RBP27.1■■□□□ 1.93
SMARCD3-201ENST00000262188 ZNF8P17098 575 aaPredicted RBP27.1■■□□□ 1.93
SMARCD3-201ENST00000262188 NSG1P42857 185 aa27.1■■□□□ 1.93
SMARCD3-201ENST00000262188 SERPINB9P50453 376 aa27.1■■□□□ 1.93
SMARCD3-201ENST00000262188 ITIH4Q14624 930 aa27.1■■□□□ 1.93
SMARCD3-201ENST00000262188 USP10Q14694 798 aaKnown RBP27.1■■□□□ 1.93
SMARCD3-201ENST00000262188 CMPK2Q5EBM0 449 aa27.1■■□□□ 1.93
SMARCD3-201ENST00000262188 PPM1JQ5JR12 505 aa27.1■■□□□ 1.93
SMARCD3-201ENST00000262188 CACNA2D3Q8IZS8 1091 aa27.1■■□□□ 1.93
SMARCD3-201ENST00000262188 DENND6BQ8NEG7 585 aa27.1■■□□□ 1.93
SMARCD3-201ENST00000262188 SARS2Q9NP81 518 aaKnown RBP27.1■■□□□ 1.93
SMARCD3-201ENST00000262188 AASDHPPTQ9NRN7 309 aa27.1■■□□□ 1.93
SMARCD3-201ENST00000262188 IQANK1A0A1B0GTG1 560 aa27.09■■□□□ 1.93
SMARCD3-201ENST00000262188 KRT37O76014 449 aa27.09■■□□□ 1.93
SMARCD3-201ENST00000262188 CDK14O94921 469 aa27.09■■□□□ 1.93
SMARCD3-201ENST00000262188 TOP3BO95985 862 aaKnown RBP27.09■■□□□ 1.93
SMARCD3-201ENST00000262188 CCND1P24385 295 aa27.09■■□□□ 1.93
SMARCD3-201ENST00000262188 PPARGP37231 505 aaPredicted RBP27.09■■□□□ 1.93
SMARCD3-201ENST00000262188 PTRHD1Q6GMV3 140 aaKnown RBP27.09■■□□□ 1.93
SMARCD3-201ENST00000262188 GAB3Q8WWW8 586 aa27.09■■□□□ 1.93
SMARCD3-201ENST00000262188 PPCSQ9HAB8 311 aa27.09■■□□□ 1.93
SMARCD3-201ENST00000262188 TRIM39Q9HCM9 518 aa27.09■■□□□ 1.93
SMARCD3-201ENST00000262188 PHPT1Q9NRX4 125 aaPredicted RBP27.09■■□□□ 1.93
SMARCD3-201ENST00000262188 PFDN6O15212 129 aa27.09■■□□□ 1.93
SMARCD3-201ENST00000262188 TRIM16O95361 564 aa27.09■■□□□ 1.93
SMARCD3-201ENST00000262188 PFN3P60673 137 aa27.09■■□□□ 1.93
SMARCD3-201ENST00000262188 CRTC3Q6UUV7 619 aa27.09■■□□□ 1.93
SMARCD3-201ENST00000262188 Q6ZSR6 202 aa27.09■■□□□ 1.93
SMARCD3-201ENST00000262188 SRRM1Q8IYB3 904 aaKnown RBP27.09■■□□□ 1.93
SMARCD3-201ENST00000262188 CCDC68Q9H2F9 335 aa27.09■■□□□ 1.93
SMARCD3-201ENST00000262188 SNX15Q9NRS6 342 aa27.09■■□□□ 1.93
SMARCD3-201ENST00000262188 NOVA2Q9UNW9 492 aaKnown RBP27.09■■□□□ 1.93
SMARCD3-201ENST00000262188 VWA7Q9Y334 891 aa27.09■■□□□ 1.93
SMARCD3-201ENST00000262188 RFPL1O75677 317 aa27.08■■□□□ 1.93
SMARCD3-201ENST00000262188 RHOBTB1O94844 696 aa27.08■■□□□ 1.93
SMARCD3-201ENST00000262188 MYCLP1P12525 358 aaPredicted RBP27.08■■□□□ 1.93
SMARCD3-201ENST00000262188 CD27P26842 260 aa27.08■■□□□ 1.93
SMARCD3-201ENST00000262188 RASA2Q15283 850 aa27.08■■□□□ 1.93
SMARCD3-201ENST00000262188 PLA2G4EQ3MJ16 856 aa27.08■■□□□ 1.93
SMARCD3-201ENST00000262188 TMEM220Q6QAJ8 160 aa27.08■■□□□ 1.93
SMARCD3-201ENST00000262188 RGL4Q8IZJ4 473 aa27.08■■□□□ 1.93
SMARCD3-201ENST00000262188 C4orf33Q8N1A6 199 aa27.08■■□□□ 1.93
SMARCD3-201ENST00000262188 RIBC1Q8N443 379 aaPredicted RBP27.08■■□□□ 1.93
SMARCD3-201ENST00000262188 TSR3Q9UJK0 312 aaKnown RBP27.08■■□□□ 1.93
SMARCD3-201ENST00000262188 PNMA8BQ9ULN7 279 aaPredicted RBP27.08■■□□□ 1.93
SMARCD3-201ENST00000262188 VPS9D1Q9Y2B5 631 aa27.08■■□□□ 1.93
SMARCD3-201ENST00000262188 ITPKAP23677 461 aa27.08■■□□□ 1.92
SMARCD3-201ENST00000262188 TCEA2Q15560 299 aa27.08■■□□□ 1.92
SMARCD3-201ENST00000262188 SLC22A18ASQ8N1D0 253 aa27.08■■□□□ 1.92
SMARCD3-201ENST00000262188 SIDT2Q8NBJ9 832 aaKnown RBP27.08■■□□□ 1.92
SMARCD3-201ENST00000262188 CCT6BQ92526 530 aa27.08■■□□□ 1.92
SMARCD3-201ENST00000262188 ATP6V1G3Q96LB4 118 aa27.08■■□□□ 1.92
SMARCD3-201ENST00000262188 GPR21Q99679 349 aa27.08■■□□□ 1.92
SMARCD3-201ENST00000262188 UNKQ9C0B0 810 aaKnown RBP27.08■■□□□ 1.92
SMARCD3-201ENST00000262188 DUSP15Q9H1R2 295 aaPredicted RBP27.08■■□□□ 1.92
SMARCD3-201ENST00000262188 TM7SF3Q9NS93 570 aa27.08■■□□□ 1.92
SMARCD3-201ENST00000262188 MOSPD1Q9UJG1 213 aa27.08■■□□□ 1.92
SMARCD3-201ENST00000262188 DMTF1Q9Y222 760 aa27.08■■□□□ 1.92
SMARCD3-201ENST00000262188 LAMA1P25391 3075 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms