RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 ERVK-8P63133 956 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 GALNT1Q10472 559 aaPredicted RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 DDX39BQ13838 428 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 ATAD1Q8NBU5 361 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 CDRT15Q96T59 188 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 OR10H1Q9Y4A9 318 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 WNK3Q9BYP7 1800 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 LOC110117498-PIK3R3F6TDL0 507 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 NOL4O94818 638 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 VIPP01282 170 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 HBQ1P09105 142 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 PEPDP12955 493 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 SMPD1P17405 629 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 RPA4Q13156 261 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 WDR45BQ5MNZ6 344 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 FAM182AQ5T1J6 154 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 FAXCQ5TGI0 409 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 MACC1Q6ZN28 852 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 OR7A2PQ8NGA2 310 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 PIGXQ8TBF5 258 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 PIK3R3Q92569 461 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 RGMAQ96B86 450 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 CELF6Q96J87 481 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 PANX1Q96RD7 426 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 CLCC1Q96S66 551 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 LPIN3Q9BQK8 851 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 PLGRKTQ9HBL7 147 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 CYP4F12Q9HCS2 524 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 GPRC5BQ9NZH0 403 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 SPATA7Q9P0W8 599 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 IFNW1P05000 195 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 ALPIP09923 528 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 SDC2P34741 201 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 NRG3P56975 720 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 PITPNAQ00169 270 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 ECT2LQ008S8 904 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 ELOAQ14241 798 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 GALNT3Q14435 633 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 EARS2Q5JPH6 523 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 RBM48Q5RL73 367 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 CTU1Q7Z7A3 348 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 ZCCHC7Q8N3Z6 543 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 METTL25Q8N6Q8 603 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 KLHL23Q8NBE8 558 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 TSPAN14Q8NG11 270 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 IRF7Q92985 503 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 PALMDQ9NP74 551 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 CFAP97Q9P2B7 532 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 A0A1W2PQH9 124 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 HYKKA2RU49 373 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 XKRYO14609 159 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 TSPAN6O43657 245 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 MPIP34949 423 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 CENPAP49450 140 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF132P52740 706 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 BAIAP2L2Q6UXY1 529 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 MDM1Q8TC05 714 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 MRPL45Q9BRJ2 306 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 CHST7Q9NS84 486 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 C1orf109Q9NX04 203 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 TMEM9Q9P0T7 183 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 SLC12A4Q9UP95 1085 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 GMPPBQ9Y5P6 360 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 KIAA1551Q9HCM1 1747 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 LCHNA4D1U4 455 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 OAS1P00973 400 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 RBBP4Q09028 425 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 GALNT2Q10471 571 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 GTF2H2Q13888 395 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 TMEM35AQ53FP2 167 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 CARD16Q5EG05 197 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 FAM91A1Q658Y4 838 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 GTF2H2CQ6P1K8 395 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 FBXO42Q6P3S6 717 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 CAMKK1Q8N5S9 505 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 POMGNT2Q8NAT1 580 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 OR2W6PQ8NHA6 318 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 SLC38A4Q969I6 547 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 MTERF3Q96E29 417 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 PHF21BQ96EK2 531 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 CXorf56Q9H5V9 222 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 SFXN1Q9H9B4 322 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 SLC28A3Q9HAS3 691 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 FARSBQ9NSD9 589 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF638Q14966 1978 aaKnown RBP4.26□□□□□ -1.73
VPS13C-202ENST00000261517 IFNA16P05015 189 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 VIPR1P32241 457 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 NAGLUP54802 743 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 BST1Q10588 318 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 SEC23BQ15437 767 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 MPP7Q5T2T1 576 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 LRIF1Q5T3J3 769 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 TMC5Q6UXY8 1006 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 TOR1AIP2Q8NFQ8 470 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 SLC35B2Q8TB61 432 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 SLC47A1Q96FL8 570 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 GMLQ99445 158 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 PCDHGB5Q9Y5G0 923 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 CNTRLQ7Z7A1 2325 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 E2F8A0AVK6 867 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms