RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 RNF187Q5TA31 235 aaPredicted RBP20.42■□□□□ 0.86
RTCA-201ENST00000260563 AGBL2Q5U5Z8 902 aa20.42■□□□□ 0.86
RTCA-201ENST00000260563 RD3Q7Z3Z2 195 aa20.42■□□□□ 0.86
RTCA-201ENST00000260563 ZC3HC1Q86WB0 502 aaKnown RBP20.42■□□□□ 0.86
RTCA-201ENST00000260563 HID1Q8IV36 788 aa20.42■□□□□ 0.86
RTCA-201ENST00000260563 PHACTR4Q8IZ21 702 aa20.42■□□□□ 0.86
RTCA-201ENST00000260563 CNPY4Q8N129 248 aa20.42■□□□□ 0.86
RTCA-201ENST00000260563 MTBPQ96DY7 904 aa20.42■□□□□ 0.86
RTCA-201ENST00000260563 ATXN7L3BQ96GX2 97 aa20.42■□□□□ 0.86
RTCA-201ENST00000260563 RMI1Q9H9A7 625 aa20.42■□□□□ 0.86
RTCA-201ENST00000260563 CARS2Q9HA77 564 aaKnown RBP20.42■□□□□ 0.86
RTCA-201ENST00000260563 APOBEC3BQ9UH17 382 aaKnown RBP20.42■□□□□ 0.86
RTCA-201ENST00000260563 PNMA8BQ9ULN7 279 aaPredicted RBP20.42■□□□□ 0.86
RTCA-201ENST00000260563 SUFUQ9UMX1 484 aa20.42■□□□□ 0.86
RTCA-201ENST00000260563 VPS9D1Q9Y2B5 631 aa20.42■□□□□ 0.86
RTCA-201ENST00000260563 DGKBQ9Y6T7 804 aa20.42■□□□□ 0.86
RTCA-201ENST00000260563 NUAK1O60285 661 aa20.41■□□□□ 0.86
RTCA-201ENST00000260563 DFNA5O60443 496 aa20.41■□□□□ 0.86
RTCA-201ENST00000260563 CDK14O94921 469 aa20.41■□□□□ 0.86
RTCA-201ENST00000260563 TNFP01375 233 aa20.41■□□□□ 0.86
RTCA-201ENST00000260563 CSF2P04141 144 aa20.41■□□□□ 0.86
RTCA-201ENST00000260563 ZNF8P17098 575 aaPredicted RBP20.41■□□□□ 0.86
RTCA-201ENST00000260563 JUNDP17535 347 aa20.41■□□□□ 0.86
RTCA-201ENST00000260563 KRT15P19012 456 aa20.41■□□□□ 0.86
RTCA-201ENST00000260563 ABCG1P45844 678 aa20.41■□□□□ 0.86
RTCA-201ENST00000260563 HK3P52790 923 aa20.41■□□□□ 0.86
RTCA-201ENST00000260563 BMPR2Q13873 1038 aa20.41■□□□□ 0.86
RTCA-201ENST00000260563 AASDHQ4L235 1098 aaPredicted RBP20.41■□□□□ 0.86
RTCA-201ENST00000260563 PRAMEF14Q5SWL7 426 aa20.41■□□□□ 0.86
RTCA-201ENST00000260563 MROH9Q5TGP6 573 aa20.41■□□□□ 0.86
RTCA-201ENST00000260563 KCTD16Q68DU8 428 aa20.41■□□□□ 0.86
RTCA-201ENST00000260563 CNSTQ6PJW8 725 aa20.41■□□□□ 0.86
RTCA-201ENST00000260563 GALNT13Q8IUC8 556 aa20.41■□□□□ 0.86
RTCA-201ENST00000260563 MINDY1Q8N5J2 469 aa20.41■□□□□ 0.86
RTCA-201ENST00000260563 MZB1Q8WU39 189 aa20.41■□□□□ 0.86
RTCA-201ENST00000260563 VPS39Q96JC1 886 aa20.41■□□□□ 0.86
RTCA-201ENST00000260563 ATP6V1G3Q96LB4 118 aa20.41■□□□□ 0.86
RTCA-201ENST00000260563 EDEM2Q9BV94 578 aa20.41■□□□□ 0.86
RTCA-201ENST00000260563 SLC13A1Q9BZW2 595 aa20.41■□□□□ 0.86
RTCA-201ENST00000260563 IGLV3-16A0A075B6K0 115 aa20.4■□□□□ 0.86
RTCA-201ENST00000260563 HMX2A2RU54 273 aa20.4■□□□□ 0.86
RTCA-201ENST00000260563 TRIM49D1C9J1S8 452 aa20.4■□□□□ 0.86
RTCA-201ENST00000260563 YKT6O15498 198 aa20.4■□□□□ 0.86
RTCA-201ENST00000260563 DNAJC6O75061 913 aa20.4■□□□□ 0.86
RTCA-201ENST00000260563 NDUFS3O75489 264 aa20.4■□□□□ 0.86
RTCA-201ENST00000260563 GNPDA1P46926 289 aa20.4■□□□□ 0.86
RTCA-201ENST00000260563 CCT8P50990 548 aa20.4■□□□□ 0.86
RTCA-201ENST00000260563 HNRNPKP61978 463 aaKnown RBP eCLIP20.4■□□□□ 0.86
RTCA-201ENST00000260563 ILF2Q12905 390 aaKnown RBP20.4■□□□□ 0.86
RTCA-201ENST00000260563 RBFAQ8N0V3 343 aa20.4■□□□□ 0.86
RTCA-201ENST00000260563 SCARF2Q96GP6 870 aaPredicted RBP20.4■□□□□ 0.86
RTCA-201ENST00000260563 BOCQ9BWV1 1114 aa20.4■□□□□ 0.86
RTCA-201ENST00000260563 KLF15Q9UIH9 416 aa20.4■□□□□ 0.86
RTCA-201ENST00000260563 NOVA2Q9UNW9 492 aaKnown RBP20.4■□□□□ 0.86
RTCA-201ENST00000260563 A0A1B0GTQ1 180 aa20.39■□□□□ 0.85
RTCA-201ENST00000260563 GFRA3O60609 400 aa20.39■□□□□ 0.85
RTCA-201ENST00000260563 TGM1P22735 817 aa20.39■□□□□ 0.85
RTCA-201ENST00000260563 NSG1P42857 185 aa20.39■□□□□ 0.85
RTCA-201ENST00000260563 RXRGP48443 463 aa20.39■□□□□ 0.85
RTCA-201ENST00000260563 B4GALNT1Q00973 533 aa20.39■□□□□ 0.85
RTCA-201ENST00000260563 DET1Q7L5Y6 550 aa20.39■□□□□ 0.85
RTCA-201ENST00000260563 TRAPPC5Q8IUR0 188 aa20.39■□□□□ 0.85
RTCA-201ENST00000260563 OR2I1PQ8NGU4 316 aa20.39■□□□□ 0.85
RTCA-201ENST00000260563 LPGAT1Q92604 370 aa20.39■□□□□ 0.85
RTCA-201ENST00000260563 CCDC97Q96F63 343 aaPredicted RBP20.39■□□□□ 0.85
RTCA-201ENST00000260563 TCEAL2Q9H3H9 227 aaPredicted RBP20.39■□□□□ 0.85
RTCA-201ENST00000260563 IL21RQ9HBE5 538 aa20.39■□□□□ 0.85
RTCA-201ENST00000260563 ZNHIT2Q9UHR6 403 aa20.39■□□□□ 0.85
RTCA-201ENST00000260563 CRYL1Q9Y2S2 319 aa20.39■□□□□ 0.85
RTCA-201ENST00000260563 OR2AG2A6NM03 316 aa20.38■□□□□ 0.85
RTCA-201ENST00000260563 FOXO6A8MYZ6 492 aa20.38■□□□□ 0.85
RTCA-201ENST00000260563 HMGB1P1B2RPK0 211 aaPredicted RBP20.38■□□□□ 0.85
RTCA-201ENST00000260563 H3BQF6 201 aa20.38■□□□□ 0.85
RTCA-201ENST00000260563 CHUKO15111 745 aa20.38■□□□□ 0.85
RTCA-201ENST00000260563 CTSEP14091 401 aa20.38■□□□□ 0.85
RTCA-201ENST00000260563 ATP1B2P14415 290 aaPredicted RBP20.38■□□□□ 0.85
RTCA-201ENST00000260563 ZNF7P17097 686 aaPredicted RBP20.38■□□□□ 0.85
RTCA-201ENST00000260563 IL9RQ01113 521 aa20.38■□□□□ 0.85
RTCA-201ENST00000260563 CRTC3Q6UUV7 619 aa20.38■□□□□ 0.85
RTCA-201ENST00000260563 TRABD2AQ86V40 505 aa20.38■□□□□ 0.85
RTCA-201ENST00000260563 LRRTM4Q86VH4 590 aa20.38■□□□□ 0.85
RTCA-201ENST00000260563 RASGEF1AQ8N9B8 481 aa20.38■□□□□ 0.85
RTCA-201ENST00000260563 TLCD1Q96CP7 247 aa20.38■□□□□ 0.85
RTCA-201ENST00000260563 ZNF514Q96K75 400 aaPredicted RBP20.38■□□□□ 0.85
RTCA-201ENST00000260563 OR2M4Q96R27 311 aa20.38■□□□□ 0.85
RTCA-201ENST00000260563 GPR22Q99680 433 aa20.38■□□□□ 0.85
RTCA-201ENST00000260563 LRRC61Q9BV99 259 aa20.38■□□□□ 0.85
RTCA-201ENST00000260563 CORO1CQ9ULV4 474 aaPredicted RBP20.38■□□□□ 0.85
RTCA-201ENST00000260563 MTO1Q9Y2Z2 717 aaKnown RBP20.38■□□□□ 0.85
RTCA-201ENST00000260563 GPSM3Q9Y4H4 160 aa20.38■□□□□ 0.85
RTCA-201ENST00000260563 FAM95CA0A1B0GW59 222 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 UBA6A0AVT1 1052 aaPredicted RBP20.37■□□□□ 0.85
RTCA-201ENST00000260563 SCAMP1O15126 338 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 GRID2O43424 1007 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 SDC3O75056 442 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 FUCA1P04066 466 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 EPHA8P29322 1005 aaPredicted RBP20.37■□□□□ 0.85
RTCA-201ENST00000260563 DNAJC3Q13217 504 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 PYCR3Q53H96 274 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 GPATCH11Q8N954 259 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms