RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 ZDHHC20Q5W0Z9 365 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 AADACL2Q6P093 401 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 FAM92BQ6ZTR7 304 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 DET1Q7L5Y6 550 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 AMZ2Q86W34 360 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 BEND7Q8N7W2 519 aaPredicted RBP18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 GPR150Q8NGU9 434 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 ACTL9Q8TC94 416 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 ZPBPQ9BS86 351 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 TRIM4Q9C037 500 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 GBA3Q9H227 469 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 KCTD3Q9Y597 815 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 EPN1Q9Y6I3 576 aaPredicted RBP18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 STX7O15400 261 aaKnown RBP18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 NDUFA10O95299 355 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 HALP42357 657 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 CAPZBP47756 277 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 PPP1CAP62136 330 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 NFE2L1Q14494 772 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 LDLRAP1Q5SW96 308 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 IRGCQ6NXR0 463 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 BORAQ6PGQ7 559 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 DDHD1Q8NEL9 900 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 ZNF398Q8TD17 642 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 DTX3LQ8TDB6 740 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 KIAA1143Q96AT1 154 aaPredicted RBP18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 OR6C1Q96RD1 312 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 ZCCHC2Q9C0B9 1178 aaKnown RBP18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 LUC7LQ9NQ29 371 aaKnown RBP18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 TMEM184BQ9Y519 407 aaPredicted RBP18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 PCDHA3Q9Y5H8 950 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 ZNF891A8MT65 544 aaPredicted RBP18.64■□□□□ 0.57
TM6SF1-201ENST00000258909 DLGAP3O95886 979 aa18.64■□□□□ 0.57
TM6SF1-201ENST00000258909 PSMB4P28070 264 aa18.64■□□□□ 0.57
TM6SF1-201ENST00000258909 AKT1P31749 480 aa18.64■□□□□ 0.57
TM6SF1-201ENST00000258909 ZNF75DP51815 510 aa18.64■□□□□ 0.57
TM6SF1-201ENST00000258909 GEMP55040 296 aa18.64■□□□□ 0.57
TM6SF1-201ENST00000258909 ITGA9Q13797 1035 aa18.64■□□□□ 0.57
TM6SF1-201ENST00000258909 FNBP1LQ5T0N5 605 aa18.64■□□□□ 0.57
TM6SF1-201ENST00000258909 CACHD1Q5VU97 1274 aa18.64■□□□□ 0.57
TM6SF1-201ENST00000258909 SLC45A3Q96JT2 553 aa18.64■□□□□ 0.57
TM6SF1-201ENST00000258909 OSBPL8Q9BZF1 889 aa18.64■□□□□ 0.57
TM6SF1-201ENST00000258909 ULBP3Q9BZM4 244 aa18.64■□□□□ 0.57
TM6SF1-201ENST00000258909 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.64■□□□□ 0.57
TM6SF1-201ENST00000258909 FAM8A1Q9UBU6 413 aa18.64■□□□□ 0.57
TM6SF1-201ENST00000258909 REXO2Q9Y3B8 237 aaKnown RBP18.64■□□□□ 0.57
TM6SF1-201ENST00000258909 CFAP20Q9Y6A4 193 aaKnown RBP18.64■□□□□ 0.57
TM6SF1-201ENST00000258909 KCNN4O15554 427 aa18.63■□□□□ 0.57
TM6SF1-201ENST00000258909 ANXA9O76027 345 aa18.63■□□□□ 0.57
TM6SF1-201ENST00000258909 PRAMEF1O95521 474 aa18.63■□□□□ 0.57
TM6SF1-201ENST00000258909 CTNNA2P26232 953 aa18.63■□□□□ 0.57
TM6SF1-201ENST00000258909 EIF3EP60228 445 aaKnown RBP18.63■□□□□ 0.57
TM6SF1-201ENST00000258909 COPS2P61201 443 aa18.63■□□□□ 0.57
TM6SF1-201ENST00000258909 RPE65Q16518 533 aa18.63■□□□□ 0.57
TM6SF1-201ENST00000258909 ANKRD20A2Q5SQ80 823 aa18.63■□□□□ 0.57
TM6SF1-201ENST00000258909 ANKRD20A1Q5TYW2 823 aa18.63■□□□□ 0.57
TM6SF1-201ENST00000258909 ANKRD20A3Q5VUR7 823 aa18.63■□□□□ 0.57
TM6SF1-201ENST00000258909 ITPRIPL1Q6GPH6 555 aa18.63■□□□□ 0.57
TM6SF1-201ENST00000258909 DARS2Q6PI48 645 aaKnown RBP18.63■□□□□ 0.57
TM6SF1-201ENST00000258909 OR4K2Q8NGD2 314 aa18.63■□□□□ 0.57
TM6SF1-201ENST00000258909 CCDC110Q8TBZ0 833 aa18.63■□□□□ 0.57
TM6SF1-201ENST00000258909 PANX2Q96RD6 677 aa18.63■□□□□ 0.57
TM6SF1-201ENST00000258909 LACRTQ9GZZ8 138 aa18.63■□□□□ 0.57
TM6SF1-201ENST00000258909 ZNF768Q9H5H4 540 aaKnown RBP18.63■□□□□ 0.57
TM6SF1-201ENST00000258909 GEMIN8Q9NWZ8 242 aaKnown RBP18.63■□□□□ 0.57
TM6SF1-201ENST00000258909 FKBPLQ9UIM3 349 aa18.63■□□□□ 0.57
TM6SF1-201ENST00000258909 MRPS18BQ9Y676 258 aaKnown RBP18.63■□□□□ 0.57
TM6SF1-201ENST00000258909 PJA2O43164 708 aa18.62■□□□□ 0.57
TM6SF1-201ENST00000258909 KCNJ13O60928 360 aa18.62■□□□□ 0.57
TM6SF1-201ENST00000258909 RBP3P10745 1247 aa18.62■□□□□ 0.57
TM6SF1-201ENST00000258909 SFTPCP11686 197 aa18.62■□□□□ 0.57
TM6SF1-201ENST00000258909 MSH3P20585 1137 aa18.62■□□□□ 0.57
TM6SF1-201ENST00000258909 LPOP22079 712 aaPredicted RBP18.62■□□□□ 0.57
TM6SF1-201ENST00000258909 ADRA1AP35348 466 aa18.62■□□□□ 0.57
TM6SF1-201ENST00000258909 POLE2P56282 527 aa18.62■□□□□ 0.57
TM6SF1-201ENST00000258909 DMPKQ09013 629 aa18.62■□□□□ 0.57
TM6SF1-201ENST00000258909 ABHD18Q0P651 414 aa18.62■□□□□ 0.57
TM6SF1-201ENST00000258909 SPARCL1Q14515 664 aa18.62■□□□□ 0.57
TM6SF1-201ENST00000258909 ATP1A1-AS1Q5TC04 95 aa18.62■□□□□ 0.57
TM6SF1-201ENST00000258909 DUS1LQ6P1R4 473 aaKnown RBP18.62■□□□□ 0.57
TM6SF1-201ENST00000258909 RANBP10Q6VN20 620 aa18.62■□□□□ 0.57
TM6SF1-201ENST00000258909 RAD9BQ6WBX8 426 aa18.62■□□□□ 0.57
TM6SF1-201ENST00000258909 CDKL3Q8IVW4 592 aaPredicted RBP18.62■□□□□ 0.57
TM6SF1-201ENST00000258909 RBM12BQ8IXT5 1001 aaKnown RBP18.62■□□□□ 0.57
TM6SF1-201ENST00000258909 ACRBPQ8NEB7 543 aa18.62■□□□□ 0.57
TM6SF1-201ENST00000258909 ZDHHC12Q96GR4 267 aa18.62■□□□□ 0.57
TM6SF1-201ENST00000258909 ASB8Q9H765 288 aa18.62■□□□□ 0.57
TM6SF1-201ENST00000258909 IMP3Q9NV31 184 aaKnown RBP18.62■□□□□ 0.57
TM6SF1-201ENST00000258909 SMOXQ9NWM0 555 aa18.62■□□□□ 0.57
TM6SF1-201ENST00000258909 C2orf81A6NN90 581 aa18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 TOX3O15405 576 aaPredicted RBP18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 PPFIA2O75334 1257 aa18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 PYGMP11217 842 aa18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 FECHP22830 423 aa18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 F8A1P23610 371 aa18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 STAT5AP42229 794 aa18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 TMPRSS15P98073 1019 aa18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 TAF1AQ15573 450 aaPredicted RBP18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 LONRF2Q1L5Z9 754 aa18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 C16orf46Q6P387 395 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms