RNA–Protein interactions for RNA: ENST00000257765.9

KHDC1-201, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KHDC1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-201ENST00000257765 RFX6Q8HWS3 928 aa18.09■□□□□ 0.49
KHDC1-201ENST00000257765 TRIM55Q9BYV6 548 aa18.09■□□□□ 0.49
KHDC1-201ENST00000257765 SPTAN1Q13813 2472 aaKnown RBP18.08■□□□□ 0.49
KHDC1-201ENST00000257765 KRT1P04264 644 aa18.08■□□□□ 0.48
KHDC1-201ENST00000257765 TMEM253P0C7T8 217 aa18.08■□□□□ 0.48
KHDC1-201ENST00000257765 EBLN1P0CF75 366 aa18.08■□□□□ 0.48
KHDC1-201ENST00000257765 SPAM1P38567 509 aa18.08■□□□□ 0.48
KHDC1-201ENST00000257765 ARL4DP49703 201 aa18.08■□□□□ 0.48
KHDC1-201ENST00000257765 RPE65Q16518 533 aa18.08■□□□□ 0.48
KHDC1-201ENST00000257765 UGT8Q16880 541 aa18.08■□□□□ 0.48
KHDC1-201ENST00000257765 ZDHHC20Q5W0Z9 365 aa18.08■□□□□ 0.48
KHDC1-201ENST00000257765 B4GALNT4Q76KP1 1039 aa18.08■□□□□ 0.48
KHDC1-201ENST00000257765 KMT5CQ86Y97 462 aa18.08■□□□□ 0.48
KHDC1-201ENST00000257765 EFCAB3Q8N7B9 438 aa18.08■□□□□ 0.48
KHDC1-201ENST00000257765 THAP4Q8WY91 577 aa18.08■□□□□ 0.48
KHDC1-201ENST00000257765 ZNF514Q96K75 400 aaPredicted RBP18.08■□□□□ 0.48
KHDC1-201ENST00000257765 RUFY1Q96T51 708 aa18.08■□□□□ 0.48
KHDC1-201ENST00000257765 CD180Q99467 661 aa18.08■□□□□ 0.48
KHDC1-201ENST00000257765 MAP3K3Q99759 626 aa18.08■□□□□ 0.48
KHDC1-201ENST00000257765 GPR87Q9BY21 358 aa18.08■□□□□ 0.48
KHDC1-201ENST00000257765 TRABDQ9H4I3 376 aa18.08■□□□□ 0.48
KHDC1-201ENST00000257765 LRRC4CQ9HCJ2 640 aa18.08■□□□□ 0.48
KHDC1-201ENST00000257765 FGF21Q9NSA1 209 aa18.08■□□□□ 0.48
KHDC1-201ENST00000257765 UBP1Q9NZI7 540 aa18.08■□□□□ 0.48
KHDC1-201ENST00000257765 PSMD13Q9UNM6 376 aa18.08■□□□□ 0.48
KHDC1-201ENST00000257765 SPTBN1Q01082 2364 aaKnown RBP18.08■□□□□ 0.48
KHDC1-201ENST00000257765 TLCD2A6NGC4 264 aa18.07■□□□□ 0.48
KHDC1-201ENST00000257765 VPS4BO75351 444 aa18.07■□□□□ 0.48
KHDC1-201ENST00000257765 PTPN3P26045 913 aa18.07■□□□□ 0.48
KHDC1-201ENST00000257765 PTPN4P29074 926 aa18.07■□□□□ 0.48
KHDC1-201ENST00000257765 HNRNPH3P31942 346 aaKnown RBP18.07■□□□□ 0.48
KHDC1-201ENST00000257765 RPS18P62269 152 aaKnown RBP18.07■□□□□ 0.48
KHDC1-201ENST00000257765 RPS15P62841 145 aaKnown RBP18.07■□□□□ 0.48
KHDC1-201ENST00000257765 DYNLT1P63172 113 aa18.07■□□□□ 0.48
KHDC1-201ENST00000257765 ODF2Q5BJF6 829 aa18.07■□□□□ 0.48
KHDC1-201ENST00000257765 DNTTIP2Q5QJE6 756 aaKnown RBP18.07■□□□□ 0.48
KHDC1-201ENST00000257765 LDLRAP1Q5SW96 308 aa18.07■□□□□ 0.48
KHDC1-201ENST00000257765 SYVN1Q86TM6 617 aa18.07■□□□□ 0.48
KHDC1-201ENST00000257765 TTC30BQ8N4P2 665 aa18.07■□□□□ 0.48
KHDC1-201ENST00000257765 RASGEF1AQ8N9B8 481 aa18.07■□□□□ 0.48
KHDC1-201ENST00000257765 DDHD1Q8NEL9 900 aa18.07■□□□□ 0.48
KHDC1-201ENST00000257765 DTX3LQ8TDB6 740 aa18.07■□□□□ 0.48
KHDC1-201ENST00000257765 TEKT5Q96M29 485 aa18.07■□□□□ 0.48
KHDC1-201ENST00000257765 DEF6Q9H4E7 631 aa18.07■□□□□ 0.48
KHDC1-201ENST00000257765 IL26Q9NPH9 171 aa18.07■□□□□ 0.48
KHDC1-201ENST00000257765 FAM153AQ9UHL3 310 aa18.07■□□□□ 0.48
KHDC1-201ENST00000257765 VPS4AQ9UN37 437 aa18.07■□□□□ 0.48
KHDC1-201ENST00000257765 UBA6A0AVT1 1052 aaPredicted RBP18.06■□□□□ 0.48
KHDC1-201ENST00000257765 OR5K3A6NET4 321 aa18.06■□□□□ 0.48
KHDC1-201ENST00000257765 TTLL8A6PVC2 850 aa18.06■□□□□ 0.48
KHDC1-201ENST00000257765 GPR39O43194 453 aa18.06■□□□□ 0.48
KHDC1-201ENST00000257765 CPNE3O75131 537 aaKnown RBP18.06■□□□□ 0.48
KHDC1-201ENST00000257765 POP7O75817 140 aaKnown RBP18.06■□□□□ 0.48
KHDC1-201ENST00000257765 TNNT3P45378 269 aaPredicted RBP18.06■□□□□ 0.48
KHDC1-201ENST00000257765 UQCRFS1P47985 274 aa18.06■□□□□ 0.48
KHDC1-201ENST00000257765 PGDP52209 483 aa18.06■□□□□ 0.48
KHDC1-201ENST00000257765 CTSCP53634 463 aa18.06■□□□□ 0.48
KHDC1-201ENST00000257765 PDE1BQ01064 536 aa18.06■□□□□ 0.48
KHDC1-201ENST00000257765 NFE2L1Q14494 772 aa18.06■□□□□ 0.48
KHDC1-201ENST00000257765 PRKD1Q15139 912 aaPredicted RBP18.06■□□□□ 0.48
KHDC1-201ENST00000257765 NOMO1Q15155 1222 aa18.06■□□□□ 0.48
KHDC1-201ENST00000257765 CHRNA6Q15825 494 aa18.06■□□□□ 0.48
KHDC1-201ENST00000257765 PPP2R5EQ16537 467 aa18.06■□□□□ 0.48
KHDC1-201ENST00000257765 CPZQ66K79 652 aa18.06■□□□□ 0.48
KHDC1-201ENST00000257765 FAM199XQ6PEV8 388 aaPredicted RBP18.06■□□□□ 0.48
KHDC1-201ENST00000257765 FAM151BQ6UXP7 276 aa18.06■□□□□ 0.48
KHDC1-201ENST00000257765 CERS6Q6ZMG9 384 aa18.06■□□□□ 0.48
KHDC1-201ENST00000257765 FAM83HQ6ZRV2 1179 aaPredicted RBP18.06■□□□□ 0.48
KHDC1-201ENST00000257765 OOSP2Q86WS3 158 aa18.06■□□□□ 0.48
KHDC1-201ENST00000257765 LURAP1LQ8IV03 231 aa18.06■□□□□ 0.48
KHDC1-201ENST00000257765 SLC35G2Q8TBE7 412 aa18.06■□□□□ 0.48
KHDC1-201ENST00000257765 RNF25Q96BH1 459 aaPredicted RBP18.06■□□□□ 0.48
KHDC1-201ENST00000257765 AKIRIN1Q9H9L7 192 aaPredicted RBP18.06■□□□□ 0.48
KHDC1-201ENST00000257765 IMP3Q9NV31 184 aaKnown RBP18.06■□□□□ 0.48
KHDC1-201ENST00000257765 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.06■□□□□ 0.48
KHDC1-201ENST00000257765 HACD3Q9P035 362 aa18.06■□□□□ 0.48
KHDC1-201ENST00000257765 DNMT3AQ9Y6K1 912 aaPredicted RBP18.06■□□□□ 0.48
KHDC1-201ENST00000257765 ICE1Q9Y2F5 2266 aa18.06■□□□□ 0.48
KHDC1-201ENST00000257765 GLYATL1P3A0A0U1RQE8 302 aa18.05■□□□□ 0.48
KHDC1-201ENST00000257765 LOC285095A0A1B0GVY8 99 aa18.05■□□□□ 0.48
KHDC1-201ENST00000257765 OR2AG2A6NM03 316 aa18.05■□□□□ 0.48
KHDC1-201ENST00000257765 MTHFD1P11586 935 aaKnown RBP18.05■□□□□ 0.48
KHDC1-201ENST00000257765 NFKB1P19838 968 aa18.05■□□□□ 0.48
KHDC1-201ENST00000257765 PBLDP30039 288 aaPredicted RBP18.05■□□□□ 0.48
KHDC1-201ENST00000257765 ARHGAP25P42331 645 aa18.05■□□□□ 0.48
KHDC1-201ENST00000257765 WNT3AP56704 352 aa18.05■□□□□ 0.48
KHDC1-201ENST00000257765 HSD11B2P80365 405 aa18.05■□□□□ 0.48
KHDC1-201ENST00000257765 XRCC4Q13426 336 aa18.05■□□□□ 0.48
KHDC1-201ENST00000257765 IL10RAQ13651 578 aa18.05■□□□□ 0.48
KHDC1-201ENST00000257765 ITGA9Q13797 1035 aa18.05■□□□□ 0.48
KHDC1-201ENST00000257765 SIRPB2Q5JXA9 342 aa18.05■□□□□ 0.48
KHDC1-201ENST00000257765 GPRC6AQ5T6X5 926 aa18.05■□□□□ 0.48
KHDC1-201ENST00000257765 LRRC38Q5VT99 294 aa18.05■□□□□ 0.48
KHDC1-201ENST00000257765 CAPRIN2Q6IMN6 1127 aaKnown RBP18.05■□□□□ 0.48
KHDC1-201ENST00000257765 TMEM220Q6QAJ8 160 aa18.05■□□□□ 0.48
KHDC1-201ENST00000257765 KDELC1Q6UW63 502 aa18.05■□□□□ 0.48
KHDC1-201ENST00000257765 GLT6D1Q7Z4J2 308 aa18.05■□□□□ 0.48
KHDC1-201ENST00000257765 D2HGDHQ8N465 521 aa18.05■□□□□ 0.48
KHDC1-201ENST00000257765 GALNT11Q8NCW6 608 aa18.05■□□□□ 0.48
KHDC1-201ENST00000257765 CPT1CQ8TCG5 803 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms