RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 AKT2P31751 481 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 CSKP41240 450 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 BEND5Q7L4P6 421 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 SIDT2Q8NBJ9 832 aaKnown RBP18.76■□□□□ 0.59
PTPRE-201ENST00000254667 RBM15BQ8NDT2 890 aaKnown RBP18.76■□□□□ 0.59
PTPRE-201ENST00000254667 ZNF563Q8TA94 476 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 C8orf48Q96LL4 319 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 TOR4AQ9NXH8 423 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 IFT80Q9P2H3 777 aaPredicted RBP18.76■□□□□ 0.59
PTPRE-201ENST00000254667 CCL22O00626 93 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 HNMTP50135 292 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 ATXN1P54253 815 aaKnown RBP18.76■□□□□ 0.59
PTPRE-201ENST00000254667 ZNF792Q3KQV3 632 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 SYPL2Q5VXT5 272 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 MSANTD2Q6P1R3 559 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 DENND6AQ8IWF6 608 aa18.76■□□□□ 0.59
PTPRE-201ENST00000254667 KCPQ6ZWJ8 1503 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 F2P00734 622 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 RFC2P35250 354 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 BNIP1Q12981 228 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 HEPACAMQ14CZ8 416 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 TEAD4Q15561 434 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 PEX5LQ8IYB4 626 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 TTC29Q8NA56 475 aaPredicted RBP18.75■□□□□ 0.59
PTPRE-201ENST00000254667 ZHX1-C8orf76Q96EF9 292 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 RBM4BQ9BQ04 359 aaKnown RBP18.75■□□□□ 0.59
PTPRE-201ENST00000254667 RBM4Q9BWF3 364 aaKnown RBP18.75■□□□□ 0.59
PTPRE-201ENST00000254667 NECTIN3Q9NQS3 549 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 DIABLOQ9NR28 239 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 ARHGEF3Q9NR81 526 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 BTBD3Q9Y2F9 522 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 GNAZP19086 355 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 ITPKBP27987 946 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 SLC1A2P43004 574 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 TAS2R39P59534 338 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 NRG1Q02297 640 aaPredicted RBP18.75■□□□□ 0.59
PTPRE-201ENST00000254667 MTX3Q5HYI7 312 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 CLEC6AQ6EIG7 209 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 KRT74Q7RTS7 529 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 SSR3Q9UNL2 185 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 LRRC37A3O60309 1634 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 GPIP06744 558 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 VPS26BQ4G0F5 336 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 ATXN7L2Q5T6C5 722 aaPredicted RBP18.75■□□□□ 0.59
PTPRE-201ENST00000254667 UXS1Q8NBZ7 420 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 XAGE5Q8WWM1 108 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 METTL21AQ8WXB1 218 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 AZIN2Q96A70 460 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 CAPN1P07384 714 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 CDH3P22223 829 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 IGFALSP35858 605 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 BLKP51451 505 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 FAM180AQ6UWF9 173 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 ARNTL2Q8WYA1 636 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 OGDHLQ9ULD0 1010 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 SCML2Q9UQR0 700 aa18.75■□□□□ 0.59
PTPRE-201ENST00000254667 RUVBL1Q9Y265 456 aaKnown RBP18.75■□□□□ 0.59
PTPRE-201ENST00000254667 TULP3O75386 442 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 TCEA3O75764 348 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 FABP3P05413 133 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 REP15Q6BDI9 236 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 KLHL17Q6TDP4 642 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 RPL10LQ96L21 214 aaKnown RBP18.74■□□□□ 0.59
PTPRE-201ENST00000254667 C1orf109Q9NX04 203 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 OR4F21O95013 312 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 BNC1Q01954 994 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 LIPEQ05469 1076 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 SRSF11Q05519 484 aaKnown RBP18.74■□□□□ 0.59
PTPRE-201ENST00000254667 SH3PXD2AQ5TCZ1 1133 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 NCBP2-AS2Q69YL0 99 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 SMYD5Q6GMV2 418 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 FAM98AQ8NCA5 519 aaKnown RBP18.74■□□□□ 0.59
PTPRE-201ENST00000254667 FAM13CQ8NE31 585 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 PIH1D2Q8WWB5 315 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 MINDY3Q9H8M7 445 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 SPATA2Q9UM82 520 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 NBNO60934 754 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 SEC24AO95486 1093 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 LAMP2P13473 410 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 DPY19L1Q2PZI1 675 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 SNAP47Q5SQN1 464 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 RTL4Q6ZR62 310 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 SMOC2Q9H3U7 446 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 SUV39H2Q9H5I1 410 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 IFNW1P05000 195 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 PRR5P85299 388 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 ECT2LQ008S8 904 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 RIPK1Q13546 671 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 PTGES3Q15185 160 aaKnown RBP18.74■□□□□ 0.59
PTPRE-201ENST00000254667 FAM171BQ6P995 826 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 NPLOC4Q8TAT6 608 aa18.74■□□□□ 0.59
PTPRE-201ENST00000254667 EIF2B4Q9UI10 523 aaKnown RBP18.74■□□□□ 0.59
PTPRE-201ENST00000254667 AJAP1Q9UKB5 411 aaPredicted RBP18.74■□□□□ 0.59
PTPRE-201ENST00000254667 TIPRLO75663 272 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 NT5EP21589 574 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 RALGPS1Q5JS13 557 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 SPPL2CQ8IUH8 684 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 NAT8LQ8N9F0 302 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 FAM208AQ9UK61 1670 aaKnown RBP18.73■□□□□ 0.59
PTPRE-201ENST00000254667 OR1F1O43749 312 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms