RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 LRRC58Q96CX6 371 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 IMP4Q96G21 291 aaKnown RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 CEP295NLQ96MC4 621 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 ZFP42Q96MM3 310 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 TMEM209Q96SK2 561 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 KAT8Q9H7Z6 458 aaKnown RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 SP140LQ9H930 580 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 DDX28Q9NUL7 540 aaKnown RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 TRNAU1APQ9NX07 287 aaKnown RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 OR12D3Q9UGF7 316 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 ZDHHC2Q9UIJ5 367 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 WBP11Q9Y2W2 641 aaKnown RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 TET1Q8NFU7 2136 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 TRIM43BA6NCK2 446 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 CENPBD1B2RD01 187 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 F5H423 210 aaPredicted RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 TK2O00142 265 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 ARPC2O15144 300 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 PMPCBO75439 489 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 PAPLNO95428 1278 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 PARNO95453 639 aaKnown RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 ZNF26P17031 533 aaPredicted RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 ATP6V1B2P21281 511 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 KCNA5P22460 613 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 RFC2P35250 354 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 POLR2JP52435 117 aaKnown RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 NDST2P52849 883 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 CRADDP78560 199 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 ECT2LQ008S8 904 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 IL5RAQ01344 420 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 POLD3Q15054 466 aaPredicted RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 ZNF181Q2M3W8 571 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 TYSND1Q2T9J0 566 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 TECRLQ5HYJ1 363 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 PIK3R6Q5UE93 754 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 OGFOD2Q6N063 350 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 GPRIN3Q6ZVF9 776 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 SPRED1Q7Z699 444 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 SLCO6A1Q86UG4 719 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 P2RY8Q86VZ1 359 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 CHPFQ8IZ52 775 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 OR8J3Q8NGG0 315 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 SPPL2BQ8TCT7 592 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 CANT1Q8WVQ1 401 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 THUMPD3Q9BV44 507 aaKnown RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 DPY30Q9C005 99 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 IL1RL2Q9HB29 575 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 NUDT4Q9NZJ9 180 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 KLHL3Q9UH77 587 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 ZNF225Q9UK10 706 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 ADAM30Q9UKF2 790 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 PCDHGA7Q9Y5G6 932 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 UBA6A0AVT1 1052 aaPredicted RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 CCDC78A2IDD5 438 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 FUOMA2VDF0 154 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 ASPDHA6ND91 283 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 ARL5CA6NH57 179 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 SNTNA6NMZ2 147 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 F8W810 466 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 KPNA6O60684 536 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 FAM20BO75063 409 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 MAP3K6O95382 1288 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 OTCP00480 354 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 AHSGP02765 367 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 CHRNGP07510 517 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 FGFR3P22607 806 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 NNMTP40261 264 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 SCNN1BP51168 640 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 CLCNKBP51801 687 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 ABRQ12979 859 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 GK3PQ14409 553 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 CDKN3Q16667 212 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 SLC36A3Q495N2 470 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 FAM219BQ5XKK7 198 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 WSCD1Q658N2 575 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 GLYATQ6IB77 296 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 ZNF544Q6NX49 715 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 CES3Q6UWW8 571 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 SPNS2Q8IVW8 549 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 FAM217AQ8IXS0 508 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 STX19Q8N4C7 294 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 HEXDCQ8WVB3 486 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 PROX1Q92786 737 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 TMCO6Q96DC7 493 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 LMLNQ96KR4 655 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 UROC1Q96N76 676 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 YME1L1Q96TA2 773 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 FBXO44Q9H4M3 255 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 NMUR1Q9HB89 426 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 FANCEQ9HB96 536 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 CATSPERZQ9NTU4 200 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 CACNG4Q9UBN1 327 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 IKZF3Q9UKT9 509 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 ERVW-1Q9UQF0 538 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 GIT1Q9Y2X7 761 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 CAB39Q9Y376 341 aaPredicted RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 CCL27Q9Y4X3 112 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 ARIH1Q9Y4X5 557 aaPredicted RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 PCDHB3Q9Y5E6 796 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 A0A0U1RQF3 1178 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms