RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 ACSL4O60488 711 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 SNAP91O60641 907 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 RFPL2O75678 378 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 FGF4P08620 206 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 TFPTP0C1Z6 253 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 RHOQP17081 205 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 LBPP18428 481 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 HTR7P34969 479 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 CD97P48960 835 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 FOXA1P55317 472 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 RING1Q06587 406 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 SPATS1Q496A3 300 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 COQ5Q5HYK3 327 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 IL31Q6EBC2 164 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 KCTD8Q6ZWB6 473 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 GAREM2Q75VX8 874 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 OR6P1Q8NGX9 317 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 SH3RF2Q8TEC5 729 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 HERVK_113Q902F9 699 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 TMEM125Q96AQ2 219 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 PABPC5Q96DU9 382 aaKnown RBP16.79■□□□□ 0.28
FOXA1-201ENST00000250448 VPS50Q96JG6 964 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 ATP13A1Q9HD20 1204 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 SDR39U1Q9NRG7 319 aaPredicted RBP16.79■□□□□ 0.28
FOXA1-201ENST00000250448 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.79■□□□□ 0.28
FOXA1-201ENST00000250448 POLR3BQ9NW08 1133 aaPredicted RBP16.79■□□□□ 0.28
FOXA1-201ENST00000250448 ZNF711Q9Y462 761 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 UNC80Q8N2C7 3258 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 PAPSS2O95340 614 aaPredicted RBP16.79■□□□□ 0.28
FOXA1-201ENST00000250448 SIX3O95343 332 aaPredicted RBP16.79■□□□□ 0.28
FOXA1-201ENST00000250448 S1PR4O95977 384 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 SLC4A1P02730 911 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 OR1E1P30953 314 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 GSK3BP49841 420 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 MAXP61244 160 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 NRG1Q02297 640 aaPredicted RBP16.79■□□□□ 0.28
FOXA1-201ENST00000250448 ZNF829Q3KNS6 432 aaPredicted RBP16.79■□□□□ 0.28
FOXA1-201ENST00000250448 CYBRD1Q53TN4 286 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 KREMEN2Q8NCW0 462 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 TRIM54Q9BYV2 358 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 NAA50Q9GZZ1 169 aaKnown RBP16.79■□□□□ 0.28
FOXA1-201ENST00000250448 MFSD1Q9H3U5 465 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 MARCH4Q9P2E8 410 aaPredicted RBP16.79■□□□□ 0.28
FOXA1-201ENST00000250448 ZFP37Q9Y6Q3 630 aaPredicted RBP16.79■□□□□ 0.28
FOXA1-201ENST00000250448 IGLV3-10A0A075B6K4 115 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 TCRBV5S2A0A599 114 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 LRRC14BA6NHZ5 514 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 F5H5T6 163 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 F11P03951 625 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 CD1DP15813 335 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 RPS9P46781 194 aaKnown RBP16.79■□□□□ 0.28
FOXA1-201ENST00000250448 ARSDP51689 593 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 RPS6KA2Q15349 733 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 FGD3Q5JSP0 725 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 AFMIDQ63HM1 303 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 RAB44Q7Z6P3 723 aaPredicted RBP16.79■□□□□ 0.28
FOXA1-201ENST00000250448 RYBPQ8N488 228 aaPredicted RBP16.79■□□□□ 0.28
FOXA1-201ENST00000250448 TUBGCP3Q96CW5 907 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 TRMT2BQ96GJ1 504 aaKnown RBP16.79■□□□□ 0.28
FOXA1-201ENST00000250448 KCNA7Q96RP8 456 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 SMG9Q9H0W8 520 aaKnown RBP16.79■□□□□ 0.28
FOXA1-201ENST00000250448 TMEM248Q9NWD8 314 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 POLG2Q9UHN1 485 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 A0A0D9SEW6 157 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 LRG1P02750 347 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 HGFP14210 728 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 CD247P20963 164 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 SMAD3P84022 425 aaKnown RBP16.78■□□□□ 0.28
FOXA1-201ENST00000250448 NEDD8Q15843 81 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 BLOC1S3Q6QNY0 202 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 IFNEQ86WN2 208 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 SPPL3Q8TCT6 385 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 CORO1BQ9BR76 489 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 TUBB1Q9H4B7 451 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 ALG2Q9H553 416 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 PKD2L2Q9NZM6 624 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 ANAPC2Q9UJX6 822 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 AGO1Q9UL18 857 aaKnown RBP16.78■□□□□ 0.28
FOXA1-201ENST00000250448 A0A1W2PRU2 124 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 DYTNA2CJ06 578 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 OR51F1A6NGY5 319 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 TRIM64BA6NI03 449 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.78■□□□□ 0.28
FOXA1-201ENST00000250448 GRM6O15303 877 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 ADH1AP07327 375 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 FDXRP22570 491 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 RAB15P59190 212 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 NFYCQ13952 458 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 ZNF697Q5TEC3 545 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 LILRA6Q6PI73 481 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 USP51Q70EK9 711 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 OVCA2Q8WZ82 227 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 IMP4Q96G21 291 aaKnown RBP16.78■□□□□ 0.28
FOXA1-201ENST00000250448 COX4I2Q96KJ9 171 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 SOX17Q9H6I2 414 aaPredicted RBP16.78■□□□□ 0.28
FOXA1-201ENST00000250448 SLC52A3Q9NQ40 469 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 INTS10Q9NVR2 710 aaKnown RBP16.78■□□□□ 0.28
FOXA1-201ENST00000250448 TMEM9Q9P0T7 183 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 BTRCQ9Y297 605 aa16.78■□□□□ 0.28
FOXA1-201ENST00000250448 UBXN8O00124 270 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms