RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 ZNF280BQ86YH2 543 aa7.45□□□□□ -1.22
RIF1-201ENST00000243326 CHPFQ8IZ52 775 aa7.45□□□□□ -1.22
RIF1-201ENST00000243326 CNIH3Q8TBE1 160 aa7.45□□□□□ -1.22
RIF1-201ENST00000243326 PYCR2Q96C36 320 aa7.45□□□□□ -1.22
RIF1-201ENST00000243326 TTYH1Q9H313 450 aaPredicted RBP7.45□□□□□ -1.22
RIF1-201ENST00000243326 VNN1O95497 513 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 UGT2B4P06133 528 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 ITGB5P18084 799 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 MANFP55145 182 aaKnown RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 SUZ12Q15022 739 aaKnown RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 TIGD6Q17RP2 521 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 HJURPQ8NCD3 748 aaPredicted RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 KLHL28Q9NXS3 571 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 VWA7Q9Y334 891 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 GOT2P00505 430 aaKnown RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 C4BPAP04003 597 aaKnown RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 IFNA16P05015 189 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 PSMD4P55036 377 aaKnown RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 ARF3P61204 181 aaPredicted RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 ARF1P84077 181 aaKnown RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 CLYBLQ8N0X4 340 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 WDR6Q9NNW5 1121 aaKnown RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 GMIPQ9P107 970 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 FBXO10Q9UK96 956 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 A0A1W2PPK0 400 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 SOX14O95416 240 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 ZNF806P0C7X5 589 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 EIF4BP23588 611 aaKnown RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 NOS2P35228 1153 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 CPT1AP50416 773 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 FSCN1Q16658 493 aaKnown RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 MYLK3Q32MK0 819 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 COPS8Q99627 209 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 AKTIPQ9H8T0 292 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 PCDHB9Q9Y5E1 797 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 CKMT1AP12532 417 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 PSEN2P49810 448 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 C2orf80Q0P641 193 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 HKDC1Q2TB90 917 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 TMEM53Q6P2H8 277 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 ULK3Q6PHR2 472 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 CXCL17Q6UXB2 119 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 SPATC1Q76KD6 591 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 PGAM4Q8N0Y7 254 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 HMCESQ96FZ2 354 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 POLR3BQ9NW08 1133 aaPredicted RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 GPR182O15218 404 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 CD40LGP29965 261 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 GSCP56915 257 aaPredicted RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 METTL7BQ6UX53 244 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 ZNF730Q6ZMV8 503 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 ZDHHC21Q8IVQ6 265 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 FSTL5Q8N475 847 aaPredicted RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 OR7D4Q8NG98 312 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 RDH11Q8TC12 318 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 DCAKDQ8WVC6 231 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 SDCBP2Q9H190 292 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 CUEDC1Q9NWM3 386 aaPredicted RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 C3orf18Q9UK00 162 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 XPNPEP2O43895 674 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 TRBC1P01850 177 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 LGALS2P05162 132 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 ITGA1P56199 1179 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 SETD6Q8TBK2 473 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 ZNF516Q92618 1163 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 HPF1Q9NWY4 346 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 SPATA31A1Q5TZJ5 1347 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 RYKP34925 604 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 TXNL4AP83876 142 aaKnown RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 HMGCS1Q01581 520 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 GALNT12Q8IXK2 581 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 TTC29Q8NA56 475 aaPredicted RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 TMBIM1Q969X1 311 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 DNAJC27Q9NZQ0 273 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 RHBDL3P58872 404 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 GTF2BQ00403 316 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 PON2Q15165 354 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 ATXN7L2Q5T6C5 722 aaPredicted RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 CRYBG2Q8N1P7 616 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 SLC38A2Q96QD8 506 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 AARSD1Q9BTE6 412 aaKnown RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 LRTM1Q9HBL6 345 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 PFDN2Q9UHV9 154 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 DHX15O43143 795 aaKnown RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 OR10H2O60403 315 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 UGT2B17O75795 530 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 ADORA2AP29274 412 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 NTSP30990 170 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 ZNF135P52742 658 aaPredicted RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 CRTC2Q53ET0 693 aaPredicted RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 MPPE1Q53F39 396 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 HMBOX1Q6NT76 420 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 PLET1Q6UQ28 207 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 FAM220AQ7Z4H9 259 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 CPNE9Q8IYJ1 553 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 PRKD2Q9BZL6 878 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 OR51V1Q9H2C8 321 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 PLCL2Q9UPR0 1127 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 ARHGEF33A8MVX0 844 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 S100A6P06703 90 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms