RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 HYIQ5T013 277 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 FBXL8Q96CD0 374 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 NODALQ96S42 347 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 MCMBPQ9BTE3 642 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 RUSC1Q9BVN2 902 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 MAGI2Q86UL8 1455 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 KCNK1O00180 336 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 GJB1P08034 283 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 SMIM10L2AP0DMW4 78 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 SMIM10L2BP0DMW5 78 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 MAB21L1Q13394 359 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 CHST15Q7LFX5 561 aaPredicted RBP11.01□□□□□ -0.65
MSH6-201ENST00000234420 RP9Q8TA86 221 aaKnown RBP11.01□□□□□ -0.65
MSH6-201ENST00000234420 PSME2Q9UL46 239 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 USP42Q9H9J4 1324 aaKnown RBP11.01□□□□□ -0.65
MSH6-201ENST00000234420 MAP3K4Q9Y6R4 1608 aa11□□□□□ -0.65
MSH6-201ENST00000234420 APOC3P02656 99 aa11□□□□□ -0.65
MSH6-201ENST00000234420 IGFBP5P24593 272 aa11□□□□□ -0.65
MSH6-201ENST00000234420 MBTD1Q05BQ5 628 aa11□□□□□ -0.65
MSH6-201ENST00000234420 NOXRED1Q6NXP6 359 aa11□□□□□ -0.65
MSH6-201ENST00000234420 LRRN1Q6UXK5 716 aa11□□□□□ -0.65
MSH6-201ENST00000234420 GPR142Q7Z601 462 aa11□□□□□ -0.65
MSH6-201ENST00000234420 AGBL3Q8NEM8 1001 aa11□□□□□ -0.65
MSH6-201ENST00000234420 VANGL1Q8TAA9 524 aaPredicted RBP11□□□□□ -0.65
MSH6-201ENST00000234420 IKZF2Q9UKS7 526 aa11□□□□□ -0.65
MSH6-201ENST00000234420 SHROOM2Q13796 1616 aa11□□□□□ -0.65
MSH6-201ENST00000234420 ZNF7P17097 686 aaPredicted RBP11□□□□□ -0.65
MSH6-201ENST00000234420 RBM34P42696 430 aaKnown RBP11□□□□□ -0.65
MSH6-201ENST00000234420 SLC6A9P48067 706 aa11□□□□□ -0.65
MSH6-201ENST00000234420 ACSM2AQ08AH3 577 aa11□□□□□ -0.65
MSH6-201ENST00000234420 SPANXN3Q5MJ09 141 aa11□□□□□ -0.65
MSH6-201ENST00000234420 ACSM2BQ68CK6 577 aa11□□□□□ -0.65
MSH6-201ENST00000234420 APTXQ7Z2E3 356 aaKnown RBP11□□□□□ -0.65
MSH6-201ENST00000234420 ANKS1BQ7Z6G8 1248 aa11□□□□□ -0.65
MSH6-201ENST00000234420 TMPRSS11BQ86T26 416 aa11□□□□□ -0.65
MSH6-201ENST00000234420 JAZF1Q86VZ6 243 aa11□□□□□ -0.65
MSH6-201ENST00000234420 OR4C6Q8NH72 309 aa11□□□□□ -0.65
MSH6-201ENST00000234420 ALG9Q9H6U8 611 aa11□□□□□ -0.65
MSH6-201ENST00000234420 ATP13A3Q9H7F0 1226 aa11□□□□□ -0.65
MSH6-201ENST00000234420 TAS2R13Q9NYV9 303 aa11□□□□□ -0.65
MSH6-201ENST00000234420 ATP6AP2A0A1C7CYW4 349 aa11□□□□□ -0.65
MSH6-201ENST00000234420 PRR5-ARHGAP8B1AHC4 643 aa11□□□□□ -0.65
MSH6-201ENST00000234420 H3BNH8 94 aa11□□□□□ -0.65
MSH6-201ENST00000234420 ATP6AP2O75787 350 aa11□□□□□ -0.65
MSH6-201ENST00000234420 CALCAP01258 141 aa11□□□□□ -0.65
MSH6-201ENST00000234420 AMPD1P23109 780 aa11□□□□□ -0.65
MSH6-201ENST00000234420 GRIA4P48058 902 aa11□□□□□ -0.65
MSH6-201ENST00000234420 CRADDP78560 199 aa11□□□□□ -0.65
MSH6-201ENST00000234420 ARHGAP8P85298 464 aa11□□□□□ -0.65
MSH6-201ENST00000234420 GXYLT1Q4G148 440 aa11□□□□□ -0.65
MSH6-201ENST00000234420 RETSATQ6NUM9 610 aa11□□□□□ -0.65
MSH6-201ENST00000234420 ANKRD23Q86SG2 305 aa11□□□□□ -0.65
MSH6-201ENST00000234420 ZNF557Q8N988 423 aaPredicted RBP11□□□□□ -0.65
MSH6-201ENST00000234420 SELENOMQ8WWX9 145 aa11□□□□□ -0.65
MSH6-201ENST00000234420 CDHR5Q9HBB8 845 aa11□□□□□ -0.65
MSH6-201ENST00000234420 NUDT15Q9NV35 164 aa11□□□□□ -0.65
MSH6-201ENST00000234420 OPTCQ9UBM4 332 aa11□□□□□ -0.65
MSH6-201ENST00000234420 EML1O00423 815 aa11□□□□□ -0.65
MSH6-201ENST00000234420 MAP2K7O14733 419 aa11□□□□□ -0.65
MSH6-201ENST00000234420 GCATO75600 419 aa11□□□□□ -0.65
MSH6-201ENST00000234420 PIAS1O75925 651 aa11□□□□□ -0.65
MSH6-201ENST00000234420 ITGAVP06756 1048 aa11□□□□□ -0.65
MSH6-201ENST00000234420 MAGEA11P43364 429 aa11□□□□□ -0.65
MSH6-201ENST00000234420 MRPS6P82932 125 aaKnown RBP11□□□□□ -0.65
MSH6-201ENST00000234420 PDIA5Q14554 519 aa11□□□□□ -0.65
MSH6-201ENST00000234420 HSDL1Q3SXM5 330 aa11□□□□□ -0.65
MSH6-201ENST00000234420 MB21D2Q8IYB1 491 aaPredicted RBP11□□□□□ -0.65
MSH6-201ENST00000234420 PDP1Q9P0J1 537 aaPredicted RBP11□□□□□ -0.65
MSH6-201ENST00000234420 FTH1P02794 183 aa11□□□□□ -0.65
MSH6-201ENST00000234420 MMP13P45452 471 aa11□□□□□ -0.65
MSH6-201ENST00000234420 PPIGQ13427 754 aaKnown RBP eCLIP11□□□□□ -0.65
MSH6-201ENST00000234420 C2orf76Q3KRA6 126 aa11□□□□□ -0.65
MSH6-201ENST00000234420 HECTD2Q5U5R9 776 aa11□□□□□ -0.65
MSH6-201ENST00000234420 KLHDC10Q6PID8 442 aa11□□□□□ -0.65
MSH6-201ENST00000234420 FRRS1Q6ZNA5 592 aa11□□□□□ -0.65
MSH6-201ENST00000234420 SHC3Q92529 594 aa11□□□□□ -0.65
MSH6-201ENST00000234420 EBF3Q9H4W6 596 aa11□□□□□ -0.65
MSH6-201ENST00000234420 TRPV4Q9HBA0 871 aa11□□□□□ -0.65
MSH6-201ENST00000234420 PCDHA3Q9Y5H8 950 aa11□□□□□ -0.65
MSH6-201ENST00000234420 AIPO00170 330 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 XKRYO14609 159 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 CLCA4Q14CN2 919 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 INTS6LQ5JSJ4 861 aaKnown RBP10.99□□□□□ -0.65
MSH6-201ENST00000234420 SLC22A15Q8IZD6 547 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 TBL1YQ9BQ87 522 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 FBRSQ9HAH7 460 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 ATP7BP35670 1465 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 PGAM1P18669 254 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 LUMP51884 338 aaPredicted RBP10.99□□□□□ -0.65
MSH6-201ENST00000234420 CREB5Q02930 508 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 PCBP2Q15366 365 aaKnown RBP eCLIP10.99□□□□□ -0.651e-7■■■■■ 32.2
MSH6-201ENST00000234420 NFE2Q16621 373 aaPredicted RBP10.99□□□□□ -0.65
MSH6-201ENST00000234420 CCDC58Q4VC31 144 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 BBS1Q8NFJ9 593 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 OR2L8Q8NGY9 312 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 NCSTNQ92542 709 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 MTMR9Q96QG7 549 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 ALG2Q9H553 416 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 TSPAN16Q9UKR8 245 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 MEMO1Q9Y316 297 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms