RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 SNX33Q8WV41 574 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 LPGAT1Q92604 370 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 HTRA1Q92743 480 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 TP53INP1Q96A56 240 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 C7orf26Q96N11 449 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 PDZD7Q9H5P4 517 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 GNEQ9Y223 722 aaKnown RBP11.44□□□□□ -0.58
LAMA4-201ENST00000230538 OR2AG2A6NM03 316 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 TM7SF2O76062 418 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 LDOC1O95751 146 aaPredicted RBP11.44□□□□□ -0.58
LAMA4-201ENST00000230538 PRNPP04156 253 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 CD247P20963 164 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 KCNA5P22460 613 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 DNASE1L1P49184 302 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 RGS8P57771 180 aaPredicted RBP11.44□□□□□ -0.58
LAMA4-201ENST00000230538 STXBP1P61764 594 aaKnown RBP11.44□□□□□ -0.58
LAMA4-201ENST00000230538 ESRP1Q6NXG1 681 aaKnown RBP11.44□□□□□ -0.58
LAMA4-201ENST00000230538 FRRS1Q6ZNA5 592 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 HMCESQ96FZ2 354 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 DEFB118Q96PH6 123 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 AGAP2Q99490 1192 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 CCDC177Q9NQR7 707 aaPredicted RBP11.44□□□□□ -0.58
LAMA4-201ENST00000230538 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.44□□□□□ -0.58
LAMA4-201ENST00000230538 A0A1W2PQ72 361 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 FBXO48Q5FWF7 155 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 DPEP3Q9H4B8 488 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 PNPLA8Q9NP80 782 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 NOS1APO75052 506 aaPredicted RBP11.43□□□□□ -0.58
LAMA4-201ENST00000230538 GOT2P00505 430 aaKnown RBP11.43□□□□□ -0.58
LAMA4-201ENST00000230538 CST3P01034 146 aaPredicted RBP11.43□□□□□ -0.58
LAMA4-201ENST00000230538 SELPP16109 830 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 RNF220Q5VTB9 566 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 SLC24A5Q71RS6 500 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 IRF2BP1Q8IU81 584 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 FATE1Q969F0 183 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 TBATAQ96M53 351 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 ALG2Q9H553 416 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 CLCNKBP51801 687 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 VBP1P61758 197 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 CBX3Q13185 183 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 SWI5Q1ZZU3 235 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 SLC30A6Q6NXT4 461 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 MSANTD2Q6P1R3 559 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 ADGRD1Q6QNK2 874 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 EBPLQ9BY08 206 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 LRCH4O75427 683 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 MAGP20916 626 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 LIMK2P53671 638 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 ART5Q96L15 291 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 PHF12Q96QT6 1004 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 PCDHGC3Q9UN70 934 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 FAM240BA0A1B0GVZ2 78 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 CLDN4O14493 209 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 INSIG1O15503 277 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 OR1F1O43749 312 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 PLIN3O60664 434 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 METTL18O95568 372 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 HSPB3Q12988 150 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 HSDL1Q3SXM5 330 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 MFSD5Q6N075 450 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 CNTD1Q8N815 330 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 UPF1Q92900 1129 aaKnown RBP eCLIP11.43□□□□□ -0.58
LAMA4-201ENST00000230538 FRMD6Q96NE9 622 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.43□□□□□ -0.58
LAMA4-201ENST00000230538 SMPD3Q9NY59 655 aaPredicted RBP11.43□□□□□ -0.58
LAMA4-201ENST00000230538 ZNF180Q9UJW8 692 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 FBXW2Q9UKT8 454 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 SNX10Q9Y5X0 201 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 TSPAN1O60635 241 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 PSMA1P25786 263 aaKnown RBP11.43□□□□□ -0.58
LAMA4-201ENST00000230538 YBEYP58557 167 aaPredicted RBP11.43□□□□□ -0.58
LAMA4-201ENST00000230538 LCP2Q13094 533 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 TATDN1Q6P1N9 297 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 RNF19BQ6ZMZ0 732 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 GJD3Q8N144 294 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 PYROXD2Q8N2H3 581 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 PIGXQ8TBF5 258 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 DQX1Q8TE96 717 aaKnown RBP11.43□□□□□ -0.58
LAMA4-201ENST00000230538 SLC4A9Q96Q91 983 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 HTATIP2Q9BUP3 242 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 SLC25A51Q9H1U9 297 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 BAZ2BQ9UIF8 2168 aaKnown RBP11.43□□□□□ -0.58
LAMA4-201ENST00000230538 SLC30A4O14863 429 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 MATN3O15232 486 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 DNAJA2O60884 412 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 COL6A1P12109 1028 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 MASP1P48740 699 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 FLT3LGP49771 235 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 RABGGTBP53611 331 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 GNA12Q03113 381 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 CBFBQ13951 182 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 ARL13AQ5H913 290 aaPredicted RBP11.43□□□□□ -0.58
LAMA4-201ENST00000230538 LDLRAP1Q5SW96 308 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 PLET1Q6UQ28 207 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 CIR1Q86X95 450 aaPredicted RBP11.43□□□□□ -0.58
LAMA4-201ENST00000230538 CCDC36Q8IYA8 594 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 ZNF567Q8N184 647 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 CRYBG2Q8N1P7 616 aa11.43□□□□□ -0.58
LAMA4-201ENST00000230538 SIDT2Q8NBJ9 832 aaKnown RBP11.43□□□□□ -0.58
LAMA4-201ENST00000230538 SPATA22Q8NHS9 363 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms