RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 CGREF1Q99674 301 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 PRRG3Q9BZD7 231 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 IFT80Q9P2H3 777 aaPredicted RBP9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 SPEF1Q9Y4P9 236 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 UGT2A1Q9Y4X1 527 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 ILVBLA1L0T0 632 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 MEN1O00255 615 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 AZIN1O14977 448 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 ANGPT2O15123 496 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 MUSKO15146 869 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 SLC7A4O43246 635 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 SYNCRIPO60506 623 aaKnown RBP9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 ALBP02768 609 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 ATXN1LP0C7T5 689 aaKnown RBP9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 PCNAP12004 261 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 IL10P22301 178 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 MRPS6P82932 125 aaKnown RBP9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 PPP1R8Q12972 351 aaKnown RBP9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 LGI2Q8N0V4 545 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 CLEC4FQ8N1N0 589 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 DCBLD1Q8N8Z6 715 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 SLC43A3Q8NBI5 491 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 ARRDC2Q8TBH0 407 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 IGSF8Q969P0 613 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 ROPN1LQ96C74 230 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 LRRC58Q96CX6 371 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 TMEM74Q96NL1 305 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 CTRCQ99895 268 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 MFSD1Q9H3U5 465 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 AGPAT4Q9NRZ5 378 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 ABCD2Q9UBJ2 740 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 POLG2Q9UHN1 485 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 FAM50BQ9Y247 325 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 NDUFAF1Q9Y375 327 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 DOCK4Q8N1I0 1966 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 CCDC162PA2VCL2 907 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 NCF1BA6NI72 391 aaPredicted RBP9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 NCF1CA8MVU1 366 aaPredicted RBP9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 ARPC2O15144 300 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 KPNA6O60684 536 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 CLASP2O75122 1294 aaKnown RBP9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 NCF1P14598 390 aaPredicted RBP9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 IL7RP16871 459 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 RENBPP51606 427 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 RAB15P59190 212 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 PLIN5Q00G26 463 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 DDR2Q16832 855 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 PAGE3Q5JUK9 113 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 HABP4Q5JVS0 413 aaKnown RBP9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 CCSAPQ6IQ19 270 aaPredicted RBP9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 DHRS4L2Q6PKH6 230 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 UBE2Q1Q7Z7E8 422 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 METTL23Q86XA0 190 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 MIER2Q8N344 545 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 HDAC2Q92769 488 aaKnown RBP9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 MYEOVQ96EZ4 313 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 TRMOQ9BU70 441 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 WBP1LQ9NX94 342 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 MTRRQ9UBK8 725 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 SNX5Q9Y5X3 404 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 COL4A4P53420 1690 aaPredicted RBP9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 PTPRDP23468 1912 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 ASPDHA6ND91 283 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 ACOX3O15254 700 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 CD3EAPO15446 510 aaKnown RBP9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 SNAP91O60641 907 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 RSL1D1O76021 490 aaKnown RBP9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 SLC2A3P11169 496 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 GFAPP14136 432 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 ZNF37AP17032 561 aaPredicted RBP9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 ALOX12P18054 663 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 FDXRP22570 491 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 PURAQ00577 322 aaKnown RBP9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 SPCS2Q15005 226 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 PLA2G4EQ3MJ16 856 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 PAGE2Q7Z2X7 111 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 CAMK1DQ8IU85 385 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 ADGRG5Q8IZF4 528 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 ZNF486Q96H40 463 aaPredicted RBP9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 REXO4Q9GZR2 422 aaKnown RBP9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 C6orf62Q9GZU0 229 aaPredicted RBP9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 SP110Q9HB58 689 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 SLC52A3Q9NQ40 469 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 ADPRHL2Q9NX46 363 aa9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 ABI2Q9NYB9 513 aaPredicted RBP9.3□□□□□ -0.92
HLA-DOA-201ENST00000229829 NLRC5Q86WI3 1866 aa9.29□□□□□ -0.92
HLA-DOA-201ENST00000229829 SOBPA7XYQ1 873 aa9.29□□□□□ -0.92
HLA-DOA-201ENST00000229829 ENPP3O14638 875 aa9.29□□□□□ -0.92
HLA-DOA-201ENST00000229829 SH3BP5O60239 455 aa9.29□□□□□ -0.92
HLA-DOA-201ENST00000229829 ICMTO60725 284 aa9.29□□□□□ -0.92
HLA-DOA-201ENST00000229829 TSPAN9O75954 239 aa9.29□□□□□ -0.92
HLA-DOA-201ENST00000229829 GNRH1P01148 92 aa9.29□□□□□ -0.92
HLA-DOA-201ENST00000229829 HMBSP08397 361 aa9.29□□□□□ -0.92
HLA-DOA-201ENST00000229829 ACVRL1P37023 503 aa9.29□□□□□ -0.92
HLA-DOA-201ENST00000229829 AGTR2P50052 363 aa9.29□□□□□ -0.92
HLA-DOA-201ENST00000229829 CPT1AP50416 773 aa9.29□□□□□ -0.92
HLA-DOA-201ENST00000229829 CCT8P50990 548 aa9.29□□□□□ -0.92
HLA-DOA-201ENST00000229829 ATP6V0D1P61421 351 aa9.29□□□□□ -0.92
HLA-DOA-201ENST00000229829 RPS6KA2Q15349 733 aa9.29□□□□□ -0.92
HLA-DOA-201ENST00000229829 FSCN1Q16658 493 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms