RNA–Protein interactions for RNA: ENST00000229251.7

COPS7A-201, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-201ENST00000229251 PTRHD1Q6GMV3 140 aaKnown RBP12.96□□□□□ -0.34
COPS7A-201ENST00000229251 METTL2BQ6P1Q9 378 aaKnown RBP12.96□□□□□ -0.34
COPS7A-201ENST00000229251 C16orf89Q6UX73 402 aa12.96□□□□□ -0.34
COPS7A-201ENST00000229251 FAM151BQ6UXP7 276 aa12.96□□□□□ -0.34
COPS7A-201ENST00000229251 ADGRG2Q8IZP9 1017 aa12.96□□□□□ -0.34
COPS7A-201ENST00000229251 NXPE1Q8N323 547 aa12.96□□□□□ -0.34
COPS7A-201ENST00000229251 CELF5Q8N6W0 485 aaKnown RBP12.96□□□□□ -0.34
COPS7A-201ENST00000229251 GIMAP7Q8NHV1 300 aa12.96□□□□□ -0.34
COPS7A-201ENST00000229251 FBXO27Q8NI29 283 aa12.96□□□□□ -0.34
COPS7A-201ENST00000229251 HCAR2Q8TDS4 363 aa12.96□□□□□ -0.34
COPS7A-201ENST00000229251 ULK4Q96C45 1275 aa12.96□□□□□ -0.34
COPS7A-201ENST00000229251 LINGO1Q96FE5 620 aa12.96□□□□□ -0.34
COPS7A-201ENST00000229251 RPL10LQ96L21 214 aaKnown RBP12.96□□□□□ -0.34
COPS7A-201ENST00000229251 LENG8Q96PV6 779 aaPredicted RBP12.96□□□□□ -0.34
COPS7A-201ENST00000229251 THTPAQ9BU02 230 aa12.96□□□□□ -0.34
COPS7A-201ENST00000229251 NUSAP1Q9BXS6 441 aaKnown RBP12.96□□□□□ -0.34
COPS7A-201ENST00000229251 OSBPL1AQ9BXW6 950 aa12.96□□□□□ -0.34
COPS7A-201ENST00000229251 LATS2Q9NRM7 1088 aa12.96□□□□□ -0.34
COPS7A-201ENST00000229251 NFKBIL1Q9UBC1 381 aaPredicted RBP12.96□□□□□ -0.34
COPS7A-201ENST00000229251 SLC7A8Q9UHI5 535 aa12.96□□□□□ -0.34
COPS7A-201ENST00000229251 FBXO10Q9UK96 956 aa12.96□□□□□ -0.34
COPS7A-201ENST00000229251 MTF2Q9Y483 593 aaPredicted RBP12.96□□□□□ -0.34
COPS7A-201ENST00000229251 TNPO3Q9Y5L0 923 aaKnown RBP12.96□□□□□ -0.34
COPS7A-201ENST00000229251 A0A088AWK7 358 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 TSPAN11A1L157 253 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 NPIPB15A6NHN6 443 aaPredicted RBP12.95□□□□□ -0.34
COPS7A-201ENST00000229251 TMEM233B4DJY2 109 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 UBFD1O14562 309 aaKnown RBP12.95□□□□□ -0.34
COPS7A-201ENST00000229251 AZIN1O14977 448 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 CDK14O94921 469 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 CLDN7O95471 211 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 POLR2EP19388 210 aaKnown RBP12.95□□□□□ -0.34
COPS7A-201ENST00000229251 GCKP35557 465 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 NSG1P42857 185 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 ACADVLP49748 655 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 CLCQ05315 142 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 PREPLQ4J6C6 727 aaPredicted RBP12.95□□□□□ -0.34
COPS7A-201ENST00000229251 KANK2Q63ZY3 851 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 ICE2Q659A1 982 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 NXNQ6DKJ4 435 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 PGM2L1Q6PCE3 622 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 CRTC1Q6UUV9 634 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 DPY19L3Q6ZPD9 716 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 ZSWIM9Q86XI8 627 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 GPSM1Q86YR5 675 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 SLC44A3Q8N4M1 653 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 POU5F2Q8N7G0 328 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 SIDT2Q8NBJ9 832 aaKnown RBP12.95□□□□□ -0.34
COPS7A-201ENST00000229251 JADE3Q92613 823 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 ZNF707Q96C28 371 aaPredicted RBP12.95□□□□□ -0.34
COPS7A-201ENST00000229251 C19orf60Q96EN9 201 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 SHCBP1LQ9BZQ2 653 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 ACSS2Q9NR19 701 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 RAD18Q9NS91 495 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 EPS15L1Q9UBC2 864 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 STOML1Q9UBI4 398 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 CRLS1Q9UJA2 301 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 FBXO4Q9UKT5 387 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 COPG1Q9Y678 874 aaKnown RBP12.95□□□□□ -0.34
COPS7A-201ENST00000229251 ANKRD12Q6UB98 2062 aa12.95□□□□□ -0.34
COPS7A-201ENST00000229251 HOXC11O43248 304 aaPredicted RBP12.94□□□□□ -0.34
COPS7A-201ENST00000229251 SNX2O60749 519 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 SRPRAP08240 638 aaKnown RBP12.94□□□□□ -0.34
COPS7A-201ENST00000229251 ITGAXP20702 1163 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 DGKAP23743 735 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 SH3BP2P78314 561 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 CUL3Q13618 768 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 KPNB1Q14974 876 aaKnown RBP12.94□□□□□ -0.34
COPS7A-201ENST00000229251 TTLL9Q3SXZ7 439 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 UGT3A2Q3SY77 523 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 ACSBG2Q5FVE4 666 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 LRRC66Q68CR7 880 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 GDPD4Q6W3E5 623 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 LARP4Q71RC2 724 aaKnown RBP eCLIP12.94□□□□□ -0.341e-6■■■□□ 16.7
COPS7A-201ENST00000229251 GRASPQ7Z6J2 395 aaPredicted RBP12.94□□□□□ -0.34
COPS7A-201ENST00000229251 RAVER1Q8IY67 606 aaKnown RBP12.94□□□□□ -0.34
COPS7A-201ENST00000229251 CPNE9Q8IYJ1 553 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 KYQ8NBH2 561 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 PJA1Q8NG27 643 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 ZNF483Q8TF39 744 aaPredicted RBP12.94□□□□□ -0.34
COPS7A-201ENST00000229251 EEF1AKMT1Q8WVE0 214 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 EXT2Q93063 718 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 PANX3Q96QZ0 392 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 SERPINI1Q99574 410 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 TACO1Q9BSH4 297 aaKnown RBP12.94□□□□□ -0.34
COPS7A-201ENST00000229251 CIPCQ9C0C6 399 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 EFCAB1Q9HAE3 211 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 MID1IP1Q9NPA3 183 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 SMOXQ9NWM0 555 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 UTP6Q9NYH9 597 aaKnown RBP12.94□□□□□ -0.34
COPS7A-201ENST00000229251 STX18Q9P2W9 335 aaKnown RBP12.94□□□□□ -0.34
COPS7A-201ENST00000229251 USP24Q9UPU5 2620 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 ERVW-1Q9UQF0 538 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 SLC27A6Q9Y2P4 619 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 MRPS23Q9Y3D9 190 aaKnown RBP12.94□□□□□ -0.34
COPS7A-201ENST00000229251 PCDHGA2Q9Y5H1 932 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.94□□□□□ -0.34
COPS7A-201ENST00000229251 CHD6Q8TD26 2715 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 KIAA1549LQ6ZVL6 1849 aa12.94□□□□□ -0.34
COPS7A-201ENST00000229251 IGLV3-16A0A075B6K0 115 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms