RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 FAM46DQ8NEK8 389 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 NID2Q14112 1375 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 MMP20O60882 483 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 SLC1A2P43004 574 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 FBXW8Q8N3Y1 598 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 LRRC57Q8N9N7 239 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 OR2T12Q8NG77 320 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 CCDC162PA2VCL2 907 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 SNUPNO95149 360 aaKnown RBP18.25■□□□□ 0.51
CLIP2-201ENST00000223398 ESR1P03372 595 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 ADSLP30566 484 aaPredicted RBP18.25■□□□□ 0.51
CLIP2-201ENST00000223398 NR1D2Q14995 579 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 ANKRD46Q86W74 232 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.25■□□□□ 0.51
CLIP2-201ENST00000223398 RAD9AQ99638 391 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 COQ4Q9Y3A0 265 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 PCDHGB3Q9Y5G1 929 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 IL1R2P27930 398 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 POLR2JP52435 117 aaKnown RBP18.25■□□□□ 0.51
CLIP2-201ENST00000223398 GPR17Q13304 367 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 LAPTM5Q13571 262 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 UBR7Q8N806 425 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 DPYSL5Q9BPU6 564 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 BTBD1Q9H0C5 482 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 BCL10O95999 233 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 COL6A2P12110 1019 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 DPYSL2Q16555 572 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 PHF19Q5T6S3 580 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 TMCO2Q7Z6W1 182 aaPredicted RBP18.25■□□□□ 0.51
CLIP2-201ENST00000223398 IGSF21Q96ID5 467 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 HIC2Q96JB3 615 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 ADGRE2Q9UHX3 823 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 KCNE1P15382 129 aa18.24■□□□□ 0.51
CLIP2-201ENST00000223398 TCF4P15884 667 aa18.24■□□□□ 0.51
CLIP2-201ENST00000223398 DDX6P26196 483 aaKnown RBP eCLIP18.24■□□□□ 0.517e-8■■■■■ 33.3
CLIP2-201ENST00000223398 MAPK11Q15759 364 aa18.24■□□□□ 0.51
CLIP2-201ENST00000223398 ARMC4Q5T2S8 1044 aa18.24■□□□□ 0.51
CLIP2-201ENST00000223398 LYSMD3Q7Z3D4 306 aa18.24■□□□□ 0.51
CLIP2-201ENST00000223398 UGT2B17O75795 530 aa18.24■□□□□ 0.51
CLIP2-201ENST00000223398 METTL18O95568 372 aa18.24■□□□□ 0.51
CLIP2-201ENST00000223398 HAPLN1P10915 354 aaPredicted RBP18.24■□□□□ 0.51
CLIP2-201ENST00000223398 NUP62P37198 522 aaPredicted RBP18.24■□□□□ 0.51
CLIP2-201ENST00000223398 ACAP2Q15057 778 aa18.24■□□□□ 0.51
CLIP2-201ENST00000223398 LY6G5CQ5SRR4 150 aa18.24■□□□□ 0.51
CLIP2-201ENST00000223398 ERVK-11Q9UQG0 969 aa18.24■□□□□ 0.51
CLIP2-201ENST00000223398 XRN1Q8IZH2 1706 aaKnown RBP18.24■□□□□ 0.51
CLIP2-201ENST00000223398 EFCAB10A6NFE3 127 aa18.24■□□□□ 0.51
CLIP2-201ENST00000223398 LEFTY2O00292 366 aa18.24■□□□□ 0.51
CLIP2-201ENST00000223398 PPIBP23284 216 aaKnown RBP18.24■□□□□ 0.51
CLIP2-201ENST00000223398 PTP4A2Q12974 167 aa18.24■□□□□ 0.51
CLIP2-201ENST00000223398 RFTN1Q14699 578 aaPredicted RBP18.24■□□□□ 0.51
CLIP2-201ENST00000223398 SLC1A5Q15758 541 aa18.24■□□□□ 0.51
CLIP2-201ENST00000223398 CDCA2Q69YH5 1023 aaPredicted RBP18.24■□□□□ 0.51
CLIP2-201ENST00000223398 SPATA19Q7Z5L4 167 aa18.24■□□□□ 0.51
CLIP2-201ENST00000223398 SETD7Q8WTS6 366 aaKnown RBP18.24■□□□□ 0.51
CLIP2-201ENST00000223398 STATHP02808 62 aa18.24■□□□□ 0.51
CLIP2-201ENST00000223398 LRRC32Q14392 662 aa18.24■□□□□ 0.51
CLIP2-201ENST00000223398 VPS26BQ4G0F5 336 aa18.24■□□□□ 0.51
CLIP2-201ENST00000223398 ARL13AQ5H913 290 aaPredicted RBP18.24■□□□□ 0.51
CLIP2-201ENST00000223398 BTN2A1Q7KYR7 527 aa18.24■□□□□ 0.51
CLIP2-201ENST00000223398 SNX20Q7Z614 316 aa18.24■□□□□ 0.51
CLIP2-201ENST00000223398 RGPD8O14715 1765 aaPredicted RBP18.23■□□□□ 0.51
CLIP2-201ENST00000223398 ILVBLA1L0T0 632 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 GALTP07902 379 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 SAGP10523 405 aaPredicted RBP18.23■□□□□ 0.51
CLIP2-201ENST00000223398 COL6A1P12109 1028 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 PRKCHP24723 683 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 RPL10P27635 214 aaKnown RBP18.23■□□□□ 0.51
CLIP2-201ENST00000223398 PARP8Q8N3A8 854 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 PYCR2Q96C36 320 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 KCND1Q9NSA2 647 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 STON1Q9Y6Q2 735 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 MYADML2A6NDP7 307 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 NRP2O60462 931 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 PRMT3O60678 531 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 C1QTNF8P60827 252 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 STXBP1P61764 594 aaKnown RBP18.23■□□□□ 0.51
CLIP2-201ENST00000223398 BNC1Q01954 994 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 ZBTB6Q15916 424 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 RNF43Q68DV7 783 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 MTERF1Q99551 399 aaKnown RBP18.23■□□□□ 0.51
CLIP2-201ENST00000223398 SMOQ99835 787 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 TBC1D10AQ9BXI6 508 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 PTGFRNQ9P2B2 879 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 SCML2Q9UQR0 700 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 CHRNA1P02708 482 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 AVPR1BP47901 424 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 SULT1C3Q6IMI6 304 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 CPSF7Q8N684 471 aaKnown RBP18.23■□□□□ 0.51
CLIP2-201ENST00000223398 CDADC1Q9BWV3 514 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 SLC17A6Q9P2U8 582 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 NALCNQ8IZF0 1738 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 DHRS12A0PJE2 317 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 MAP2K7O14733 419 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 TNFAIP8O95379 198 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 BNIP2Q12982 314 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 EOGTQ5NDL2 527 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 ZYG11AQ6WRX3 759 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 OR2AP1Q8NGE2 309 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 TMEM209Q96SK2 561 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms