RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 PLA2G2CQ5R387 149 aa26.82■■□□□ 1.88
CHMP4B-201ENST00000217402 ZBTB9Q96C00 473 aa26.82■■□□□ 1.88
CHMP4B-201ENST00000217402 DHRS4Q9BTZ2 278 aa26.82■■□□□ 1.88
CHMP4B-201ENST00000217402 NUSAP1Q9BXS6 441 aaKnown RBP26.82■■□□□ 1.88
CHMP4B-201ENST00000217402 TMEM168Q9H0V1 697 aa26.82■■□□□ 1.88
CHMP4B-201ENST00000217402 SARS2Q9NP81 518 aaKnown RBP26.82■■□□□ 1.88
CHMP4B-201ENST00000217402 SLC23A2Q9UGH3 650 aa26.82■■□□□ 1.88
CHMP4B-201ENST00000217402 DNAJC16Q9Y2G8 782 aa26.82■■□□□ 1.88
CHMP4B-201ENST00000217402 KNL1Q8NG31 2342 aa26.81■■□□□ 1.88
CHMP4B-201ENST00000217402 E5RI56 91 aa26.81■■□□□ 1.88
CHMP4B-201ENST00000217402 H3BMM5 538 aa26.81■■□□□ 1.88
CHMP4B-201ENST00000217402 KHNYNO15037 678 aaKnown RBP26.81■■□□□ 1.88
CHMP4B-201ENST00000217402 ITGA2BP08514 1039 aa26.81■■□□□ 1.88
CHMP4B-201ENST00000217402 CHRM3P20309 590 aa26.81■■□□□ 1.88
CHMP4B-201ENST00000217402 BLKP51451 505 aa26.81■■□□□ 1.88
CHMP4B-201ENST00000217402 HECTD2Q5U5R9 776 aa26.81■■□□□ 1.88
CHMP4B-201ENST00000217402 NAPRTQ6XQN6 538 aa26.81■■□□□ 1.88
CHMP4B-201ENST00000217402 CCM2Q9BSQ5 444 aa26.81■■□□□ 1.88
CHMP4B-201ENST00000217402 ERVMER34-1Q9H9K5 563 aa26.81■■□□□ 1.88
CHMP4B-201ENST00000217402 NCDNQ9UBB6 729 aa26.81■■□□□ 1.88
CHMP4B-201ENST00000217402 CTNNAL1Q9UBT7 734 aa26.81■■□□□ 1.88
CHMP4B-201ENST00000217402 FETUBQ9UGM5 382 aa26.81■■□□□ 1.88
CHMP4B-201ENST00000217402 CORO1CQ9ULV4 474 aaPredicted RBP26.81■■□□□ 1.88
CHMP4B-201ENST00000217402 CACNA1EQ15878 2313 aa26.81■■□□□ 1.88
CHMP4B-201ENST00000217402 PI4KAP42356 2102 aa26.81■■□□□ 1.88
CHMP4B-201ENST00000217402 F8W8V4 182 aa26.8■■□□□ 1.88
CHMP4B-201ENST00000217402 MROH9Q5TGP6 573 aa26.8■■□□□ 1.88
CHMP4B-201ENST00000217402 CCL4L1Q8NHW4 92 aa26.8■■□□□ 1.88
CHMP4B-201ENST00000217402 PANX3Q96QZ0 392 aa26.8■■□□□ 1.88
CHMP4B-201ENST00000217402 ELF4Q99607 663 aaPredicted RBP26.8■■□□□ 1.88
CHMP4B-201ENST00000217402 TSSK1BQ9BXA7 367 aa26.8■■□□□ 1.88
CHMP4B-201ENST00000217402 PSMC3IPQ9P2W1 217 aaPredicted RBP26.8■■□□□ 1.88
CHMP4B-201ENST00000217402 SLC24A2Q9UI40 661 aa26.8■■□□□ 1.88
CHMP4B-201ENST00000217402 KCNK6Q9Y257 313 aa26.8■■□□□ 1.88
CHMP4B-201ENST00000217402 COMMD10Q9Y6G5 202 aa26.8■■□□□ 1.88
CHMP4B-201ENST00000217402 H3BM21 787 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 ARHGAP33O14559 1287 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 SDC3O75056 442 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 CTSEP14091 401 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 PGGT1BP53609 377 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 CDKN2DP55273 166 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 BOP1Q14137 746 aaKnown RBP26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 CASP8Q14790 479 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 HLA-BQ31612 363 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 PRRT3Q5FWE3 981 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 FAM45BPQ6NSW5 357 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 PIM3Q86V86 326 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 AMZ2Q86W34 360 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 SPNS2Q8IVW8 549 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 OR2I1PQ8NGU4 316 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 FAM45AQ8TCE6 357 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 ELMO1Q92556 727 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 GPR22Q99680 433 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 LRRC61Q9BV99 259 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 GTPBP2Q9BX10 602 aaKnown RBP26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 CAB39LQ9H9S4 337 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 KLC4Q9NSK0 619 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 GALPQ9UBC7 116 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 TBK1Q9UHD2 729 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 ZNF180Q9UJW8 692 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 SLC39A10Q9ULF5 831 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 MED16Q9Y2X0 877 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 FRYLO94915 3013 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 CELA2BP08218 269 aaPredicted RBP26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 SYPP08247 313 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 IL9RQ01113 521 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 CTBSQ01459 385 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 C1orf61Q13536 156 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 ADGRD1Q6QNK2 874 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 TAOK1Q7L7X3 1001 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 DCLK2Q8N568 766 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 OXR1Q8N573 874 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 KCNJ9Q92806 393 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 LINC00615Q96LM1 132 aaPredicted RBP26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 ZIM3Q96PE6 472 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 OLFM1Q99784 485 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 TIMM29Q9BSF4 260 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 OSGEPL1Q9H4B0 414 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 IL21RQ9HBE5 538 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 TRNAU1APQ9NX07 287 aaKnown RBP26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 VWA7Q9Y334 891 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 ST14Q9Y5Y6 855 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 NFS1Q9Y697 457 aa26.79■■□□□ 1.88
CHMP4B-201ENST00000217402 PCDH15Q96QU1 1955 aa26.78■■□□□ 1.88
CHMP4B-201ENST00000217402 TLDC2A0PJX2 215 aa26.78■■□□□ 1.88
CHMP4B-201ENST00000217402 VPS26AO75436 327 aa26.78■■□□□ 1.88
CHMP4B-201ENST00000217402 ENGP17813 658 aa26.78■■□□□ 1.88
CHMP4B-201ENST00000217402 AK4P27144 223 aaPredicted RBP26.78■■□□□ 1.88
CHMP4B-201ENST00000217402 CCR7P32248 378 aa26.78■■□□□ 1.88
CHMP4B-201ENST00000217402 ARRB1P49407 418 aaPredicted RBP26.78■■□□□ 1.88
CHMP4B-201ENST00000217402 SERPINB9P50453 376 aa26.78■■□□□ 1.88
CHMP4B-201ENST00000217402 HNRNPKP61978 463 aaKnown RBP eCLIP26.78■■□□□ 1.888e-6■■■■□ 19.7
CHMP4B-201ENST00000217402 SPEM2Q0P670 501 aa26.78■■□□□ 1.88
CHMP4B-201ENST00000217402 NFE2L1Q14494 772 aa26.78■■□□□ 1.88
CHMP4B-201ENST00000217402 IL27RAQ6UWB1 636 aa26.78■■□□□ 1.88
CHMP4B-201ENST00000217402 IQCKQ8N0W5 287 aa26.78■■□□□ 1.88
CHMP4B-201ENST00000217402 SIDT2Q8NBJ9 832 aaKnown RBP26.78■■□□□ 1.88
CHMP4B-201ENST00000217402 GPR21Q99679 349 aa26.78■■□□□ 1.88
CHMP4B-201ENST00000217402 GAREM1Q9H706 876 aa26.78■■□□□ 1.88
CHMP4B-201ENST00000217402 GULP1Q9UBP9 304 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms