RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 TRIM49D1C9J1S8 452 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 NPIPA2E9PIF3 369 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 NPIPA3F8WFD2 350 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 KPNA4O00629 521 aaPredicted RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 PRICKLE3O43900 615 aaPredicted RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 COQ9O75208 318 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 PABPC4LP0CB38 370 aaKnown RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 SELPP16109 830 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 PRPH2P23942 346 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 FASLGP48023 281 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 CLRN1P58418 232 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 CDKL4Q5MAI5 379 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.42□□□□□ -1.86
NEB-201ENST00000172853 PDE12Q6L8Q7 609 aaKnown RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 PRSS58Q8IYP2 241 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 FOXJ1Q92949 421 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 COPS8Q99627 209 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 METTL8Q9H825 291 aaKnown RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.42□□□□□ -1.86
NEB-201ENST00000172853 SEC14L3Q9UDX4 400 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 LOC105369274A0A096LPK9 316 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 HTR3EA5X5Y0 456 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 BNIP2Q12982 314 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 RAB31Q13636 194 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 ZNF268Q14587 947 aaPredicted RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 TMEM201Q5SNT2 666 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 USP53Q70EK8 1073 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 CIR1Q86X95 450 aaPredicted RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 FAM126BQ8IXS8 530 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 CCDC116Q8IYX3 515 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 OR4N4Q8N0Y3 316 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 ZNF75CPQ92670 426 aaPredicted RBP3.42□□□□□ -1.86
NEB-201ENST00000172853 LRRC1Q9BTT6 524 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 ABCB6Q9NP58 842 aa3.42□□□□□ -1.86
NEB-201ENST00000172853 MATN2O00339 956 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 DDNO94850 711 aaPredicted RBP3.41□□□□□ -1.86
NEB-201ENST00000172853 ITGA2BP08514 1039 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 RNF144AP50876 292 aaPredicted RBP3.41□□□□□ -1.86
NEB-201ENST00000172853 ARG2P78540 354 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 MTM1Q13496 603 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 POU6F1Q14863 301 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 QPRTQ15274 297 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 RUNDC3AQ59EK9 446 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 OTOP2Q7RTS6 562 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 WDR49Q8IV35 697 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 NATD1Q8N6N6 113 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 OR4C6Q8NH72 309 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 TCF7L1Q9HCS4 588 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 MID1IP1Q9NPA3 183 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 MORF4L1Q9UBU8 362 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 ACTL7AQ9Y615 435 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 GJE1A6NN92 205 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 BDNFP23560 247 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 GCNT1Q02742 428 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 MOGQ16653 247 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 OLFML1Q6UWY5 402 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 SLC41A1Q8IVJ1 513 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 OFCC1Q8IZS5 231 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 PXYLP1Q8TE99 480 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 CDCA5Q96FF9 252 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 KLHDC7BQ96G42 594 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 PLEKHG4BQ96PX9 1271 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 WDR77Q9BQA1 342 aaPredicted RBP3.41□□□□□ -1.86
NEB-201ENST00000172853 TKTL2Q9H0I9 626 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 CYP8B1Q9UNU6 501 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 SLC2A1P11166 492 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 ITGB5P18084 799 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 MAGEA2P43356 314 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 RRAS2P62070 204 aaPredicted RBP3.41□□□□□ -1.86
NEB-201ENST00000172853 ELOCQ15369 112 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 TNFAIP8L2Q6P589 184 aaPredicted RBP3.41□□□□□ -1.86
NEB-201ENST00000172853 KATNAL2Q8IYT4 538 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 SLC43A3Q8NBI5 491 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 STAG3L4Q8TBR4 150 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 CD99L2Q8TCZ2 262 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 CENPOQ9BU64 300 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 LGR4Q9BXB1 951 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 DZANK1Q9NVP4 752 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 INSL6Q9Y581 213 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 PCDHA3Q9Y5H8 950 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 SCAF4O95104 1147 aaKnown RBP3.41□□□□□ -1.86
NEB-201ENST00000172853 HOXB6P17509 224 aaKnown RBP3.41□□□□□ -1.86
NEB-201ENST00000172853 CPN2P22792 545 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 SRP14P37108 136 aaKnown RBP3.41□□□□□ -1.86
NEB-201ENST00000172853 CAP2P40123 477 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 DGKGP49619 791 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 ADAM8P78325 824 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 PITPNAQ00169 270 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 SPIBQ01892 262 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 SLC1A5Q15758 541 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 ENPP7Q6UWV6 458 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 TMEM110Q86TL2 294 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 ARID3BQ8IVW6 561 aaPredicted RBP3.41□□□□□ -1.86
NEB-201ENST00000172853 SMYD4Q8IYR2 804 aaPredicted RBP3.41□□□□□ -1.86
NEB-201ENST00000172853 MARVELD2Q8N4S9 558 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 ALPK1Q96QP1 1244 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 C9orf16Q9BUW7 83 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 MKKSQ9NPJ1 570 aaPredicted RBP3.41□□□□□ -1.86
NEB-201ENST00000172853 C12orf4Q9NQ89 552 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 AGAP5A6NIR3 686 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms