RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 LYSMD3Q7Z3D4 306 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 NKAPQ8N5F7 415 aaKnown RBP8.19□□□□□ -1.1
CDC27-201ENST00000066544 OR4F6Q8NGB9 312 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 STON2Q8WXE9 905 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 ZUFSPQ96AP4 578 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 TRIB3Q96RU7 358 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 PDFQ9HBH1 243 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 LATS2Q9NRM7 1088 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 SMPD3Q9NY59 655 aaPredicted RBP8.19□□□□□ -1.1
CDC27-201ENST00000066544 UTS2RQ9UKP6 389 aa8.19□□□□□ -1.1
CDC27-201ENST00000066544 NOBOXO60393 691 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 TSPAN12O95859 305 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 EPOP01588 193 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 ATF6P18850 670 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 ALDH3B2P48448 385 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 MAPKAPK2P49137 400 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 CLCN2P51788 898 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 SH3BGRP55822 239 aaPredicted RBP8.18□□□□□ -1.1
CDC27-201ENST00000066544 ADRM1Q16186 407 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 TYSND1Q2T9J0 566 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 GTDC1Q4AE62 458 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 FUT10Q6P4F1 479 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 TMEM199Q8N511 208 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 NCLNQ969V3 563 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 THAP11Q96EK4 314 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 AURKBQ96GD4 344 aaPredicted RBP8.18□□□□□ -1.1
CDC27-201ENST00000066544 GLT1D1Q96MS3 346 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 CIPCQ9C0C6 399 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 TLR9Q9NR96 1032 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 OLA1Q9NTK5 396 aaKnown RBP8.18□□□□□ -1.1
CDC27-201ENST00000066544 RIC8BQ9NVN3 520 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 HACD3Q9P035 362 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 KLQ9UEF7 1012 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.18□□□□□ -1.1
CDC27-201ENST00000066544 GREB1Q4ZG55 1949 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 SLC38A8A6NNN8 435 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 VNN2O95498 520 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 ALBP02768 609 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 CDK9P50750 372 aaKnown RBP8.18□□□□□ -1.1
CDC27-201ENST00000066544 ERVK-8P63133 956 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 ANKDD1AQ495B1 522 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 ARMC12Q5T9G4 340 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 DTWD1Q8N5C7 304 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 GPR150Q8NGU9 434 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 UPF1Q92900 1129 aaKnown RBP eCLIP8.18□□□□□ -1.13e-6■□□□□ 10
CDC27-201ENST00000066544 DTNBP1Q96EV8 351 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 MUS81Q96NY9 551 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 MGME1Q9BQP7 344 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 IPPKQ9H8X2 491 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 SMURF2Q9HAU4 748 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 FNIP2Q9P278 1114 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 LIMD1Q9UGP4 676 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 ANKRD33BA6NCL7 494 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 KRT87PA6NCN2 255 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 GNGT2O14610 69 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 GSTA4O15217 222 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 ACOX3O15254 700 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 HRH2P25021 359 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 CA5AP35218 305 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 SUOXP51687 545 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 ABRAXAS2Q15018 415 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 OR10A6Q8NH74 314 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 TADA1Q96BN2 335 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 ISOC1Q96CN7 298 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 MAGEH1Q9H213 219 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 INTS10Q9NVR2 710 aaKnown RBP8.18□□□□□ -1.1
CDC27-201ENST00000066544 MAN1A2O60476 641 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 ATE1O95260 518 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 PARNO95453 639 aaKnown RBP8.18□□□□□ -1.1
CDC27-201ENST00000066544 MATN4O95460 622 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 IL7RP16871 459 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 ACLYP53396 1101 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 RHOAP61586 193 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 PLD1Q13393 1074 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 TAF1AQ15573 450 aaPredicted RBP8.18□□□□□ -1.1
CDC27-201ENST00000066544 FGD3Q5JSP0 725 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 TMTC4Q5T4D3 741 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 KCTD8Q6ZWB6 473 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 ANKRD46Q86W74 232 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 PHACTR4Q8IZ21 702 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 ITFG1Q8TB96 612 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 DNMT3LQ9UJW3 386 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 LRFN2Q9ULH4 789 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 TMCO1Q9UM00 188 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 A0A0J9YVX5 310 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 E2F3O00716 465 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 GMNNO75496 209 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 PRKACGP22612 351 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 LAPTM4AQ15012 233 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 KIAA1841Q6NSI8 718 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 RGMBQ6NW40 437 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 FAM117BQ6P1L5 589 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 CYP20A1Q6UW02 462 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 LRRC43Q8N309 656 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 PARP8Q8N3A8 854 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 SEPT8Q92599 483 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 TRIM54Q9BYV2 358 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 PAIP1Q9H074 479 aaKnown RBP8.18□□□□□ -1.1
CDC27-201ENST00000066544 SLC52A3Q9NQ40 469 aa8.18□□□□□ -1.1
CDC27-201ENST00000066544 PKP3Q9Y446 797 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms